Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K360051BBa_K360051 Version 1 (Component)CcaS_CcaR Green light response in Synechocystis sp. PCC6803
BBa_I15008BBa_I15008 Version 1 (Component)heme oxygenase (ho1) from Synechocystis
BBa_I15009BBa_I15009 Version 1 (Component)phycocyanobilin:ferredoxin oxidoreductase (PcyA) from synechocystis
BBa_K592001BBa_K592001 Version 1 (Component)CcaS, green light sensor from Synechocystis sp. PCC6803
BBa_K125100BBa_K125100 Version 1 (Component)nir promoter from <I>Synechocystis</I> sp. PCC6803
RS1BBa_K743000 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
cjBlueBBa_K592011 Version 1 (Component)cjBlue, green chromoprotein
BBa_K390001BBa_K390001 Version 1 (Component)5'UTR and native RBS from psbA2 in Synechocystis sp. PCC 6803
BBa_K390002BBa_K390002 Version 1 (Component)5'UTR and consensus RBS from psbA2 in Synechocystis sp. PCC 6803
RS2BBa_K743001 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
PCaa3BBa_K743002 Version 1 (Component)PCaa3 promoter and native rbs from Synechocystis PCC6803
BBa_J52642BBa_J52642 Version 1 (Component)Green Flourescence Protein
BBa_K2116017BBa_K2116017 Version 1 (Component)super folder green fluorescent protein
BBa_E0044BBa_E0044 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212)
BBa_M30109BBa_M30109 Version 1 (Component)Light responsive system, dual regulation
BBa_K608101BBa_K608101 Version 1 (Component)CcaR, green light response regulator
pirABBa_K273002 Version 1 (Component)Pirin like protein (pirA) from <i>Synechocystis sp PCC6803</i>
BBa_K273003BBa_K273003 Version 1 (Component)Pirin like protein (pirB) from <i>Synechocystis sp PCC6803</i>
BBa_K592029BBa_K592029 Version 1 (Component)PcpcG2-B0034-BFP green light sensor output
BBa_K125502BBa_K125502 Version 1 (Component)phaB BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1993)
GlrNBBa_K225000 Version 1 (Component)Green light receptor
BBa_K1601001BBa_K1601001 Version 1 (Component)Cytochrome C Synechocystis sp without stop codon
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
BBa_I741005BBa_I741005 Version 1 (Component)XylR Transcriptional Regulator Right Facing
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K743003BBa_K743003 Version 1 (Component)Pta promoter and native rbs from Synechocystis PCC6803
BBa_K1033916BBa_K1033916 Version 1 (Component)amajLime, yellow-green chromoprotein
psb1C3_intBBa_K743006 Version 1 (Component)psb1C3_IntK recombination plasmid for Synechocystis PCC6803
psb1C3_intBBa_K743007 Version 1 (Component)psb1C3_IntKR recombination plasmid for Synechocystis PCC6803
psb1C3_intBBa_K743008 Version 1 (Component)psb1C3_IntKR recombination plasmid for Synechocystis PCC6803
BBa_K786002BBa_K786002 Version 1 (Component)Sensory rhodopsin II (SRII) with HtrII & Tar, sensitive to blue-green light
BBa_K346002BBa_K346002 Version 1 (Component)PmerT promoter (mercury-responsive)
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_M11409BBa_M11409 Version 1 (Component)Promoter of pglnBP2 gene in Synechocystis sp. PCC 6803.
BBa_K390007BBa_K390007 Version 1 (Component)sigE Type II promoter from Synechocystis sp. PCC 6803
BBa_K390012BBa_K390012 Version 1 (Component)pilA1 Type III promoter from Synechocystis sp. PCC 6803
BBa_K390010BBa_K390010 Version 1 (Component)hspA Type I Promoter from Synechocystis sp. PCC 6803
BBa_K390008BBa_K390008 Version 1 (Component)lrtA Type II promoter from Synechocystis sp. PCC 6803
BBa_K390009BBa_K390009 Version 1 (Component)sigF Type III promoter from Synechocystis sp. PCC 6803
BBa_K390006BBa_K390006 Version 1 (Component)sigA Type I promoter from Synechocystis sp. PCC 6803
BBa_K390005BBa_K390005 Version 1 (Component)psbA2 Type I promoter from Synechocystis sp. PCC 6803
BBa_K1476001BBa_K1476001 Version 1 (Component)PilA1 from Synechocystis sp. PCC 6803