Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K811001BBa_K811001 Version 1 (Component)ClyA (N-terminus his tagged)
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K249008BBa_K249008 Version 1 (Component)YFP with N-terminal Arganine Tag
LacIBBa_K143033 Version 1 (Component)LacI (Lva<sup>-</sup>, N-terminal deletion) regulatory protein
RFC105 ABBa_K1362414 Version 1 (Component)N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A
BBa_K811002BBa_K811002 Version 1 (Component)ClyA (C-terminus his tagged)
GFP-XylEBBa_K316006 Version 1 (Component)N-terminus his tagged-GFP-XylE fusion protein
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
BBa_K1423000BBa_K1423000 Version 1 (Component)BCLA N-terminal Domain
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
RFC105 NNBBa_K1362415 Version 1 (Component)N-terminal splicing overhang TGCT=Cys+1/3 Leu|Ile RFC[105] overhang NN
BBa_K331030BBa_K331030 Version 1 (Component)Tet Repressible N-terminal Arg Tagged EYFP (no terminator)
lacZ aBBa_E0033 Version 1 (Component)LacZ alpha fragment; complements matching N-terminal deletion mutant (lacZ-omega)
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
HIC generaBBa_K1602020 Version 1 (Component)Inducible generator of Humicola insolens cutinase (HIC) with N-terminal His-Tag
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
Hin LVABBa_J31001 Version 1 (Component)DNA invertase Hin tagged with LVA
BBa_K331001BBa_K331001 Version 1 (Component)ECFP with N-terminal Arginine Tag
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
HisTag-HICBBa_K1602018 Version 1 (Component)Humicola insolens cutinase with N-terminal His-Tag
BBa_K1404007BBa_K1404007 Version 1 (Component)p70-CsgA-His, His-tagged curli generator
CBDcipABBa_K1615111 Version 1 (Component)CBDcipA with N and C-terminal linker in RFC25
BBa_K1491022BBa_K1491022 Version 1 (Component)N-terminus of T7 RNA Polymerase
BBa_K1321014BBa_K1321014 Version 1 (Component)CBDCipA with N and C-terminal linker
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
NpuDnaE(N)BBa_K1362400 Version 1 (Component)NpuDnaE N-Intein cloning piece
BBa_K1404008BBa_K1404008 Version 1 (Component)p70-CsgA-His*2, double His-tagged curli generator
HisTag-GFPBBa_K1602021 Version 1 (Component)Green fluorescent protein (GFP) with N-terminal His-Tag
BBa_K1027003BBa_K1027003 Version 1 (Component)fabA with His tag (N-terminus)
BBa_K772002BBa_K772002 Version 1 (Component)EpCAM Binding Dock: N terminus
BBa_K331033BBa_K331033 Version 1 (Component)Tet Repressible C-terminal Arg Tagged ECFP (no terminator)
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_K1162010BBa_K1162010 Version 1 (Component)promoter+rbs and N-terminal 10x His Tag
BBa_K1092105BBa_K1092105 Version 1 (Component)RFP N terminus
BBa_K249023BBa_K249023 Version 1 (Component)Target N-terminal YFP into Lumazine
BBa_K1491030BBa_K1491030 Version 1 (Component)His Tagged T7 RNA Polymerase
BBa_K249024BBa_K249024 Version 1 (Component)Target N-terminal YFP and N-terminal CFP into Lumazine
BBa_J70560BBa_J70560 Version 1 (Component)GFP, with N-terminal 6 his