SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_M1110
BBa_M1110 Version 1 (Component)
Complete Pyrene Degradation pathway

BBa_M1105
BBa_M1105 Version 1 (Component)
Pyrene degradation enzyme RBS

BBa_K1465302
BBa_K1465302 Version 1 (Component)
Isobutanol pathway

BBa_K1399005
BBa_K1399005 Version 1 (Component)
GFP (mut3b) with AAV-ssrA degradation tag

BBa_M0052
BBa_M0052 Version 1 (Component)
AANDENYADAS (moderately fast) SsrA degradation tag.

BBa_K1399004
BBa_K1399004 Version 1 (Component)
GFP (mut3b) with LVA-ssrA degradation tag

BBa_M1354
BBa_M1354 Version 1 (Component)
Complete pathway for 1-butanol

Lac
BBa_K500003 Version 1 (Component)
lignin degradation 4

BBa_K500001
BBa_K500001 Version 1 (Component)
lignin degradation 2

BBa_K500002
BBa_K500002 Version 1 (Component)
lignin degradation 3

BBa_K500000
BBa_K500000 Version 1 (Component)
lignin degradation 1

BBa_K517003
BBa_K517003 Version 1 (Component)
beta-pinene synthase

BBa_K517002
BBa_K517002 Version 1 (Component)
alpha-pinene synthase

BBa_K1399007
BBa_K1399007 Version 1 (Component)
GFP (mut3b) with SsrA-DAS+2 degradation tag

BBa_K125502
BBa_K125502 Version 1 (Component)
phaB BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1993)

BBa_K1051262
BBa_K1051262 Version 1 (Component)
The measurement pathway of degradation tag K1051208.

BBa_K1051260
BBa_K1051260 Version 1 (Component)
The measurement pathway of degradation tag K1051206.

BBa_K1051261
BBa_K1051261 Version 1 (Component)
The measurement pathway of degradation tag K1051207.

BBa_P121117
BBa_P121117 Version 1 (Component)
Myrcene Synthase complete construct (F2620, B0034 optimized)

BBa_M0051
BBa_M0051 Version 1 (Component)
AANDENYNYADAS. (Fast) SsrA degradation tag.

BBa_K1399006
BBa_K1399006 Version 1 (Component)
GFP (mut3b) with LAA-ssrA degradation tag

BBa_K1399008
BBa_K1399008 Version 1 (Component)
GFP (mut3b) with DAS-ssrA degradation tag

BBa_P111117
BBa_P111117 Version 1 (Component)
Myrcene Synthase complete construct (R0040, B0034 optimized)

LAA
BBa_M0050 Version 1 (Component)
AANDENYALAA. (Very fast) SsrA degradation tag.

FadA
BBa_K861400 Version 1 (Component)
FadA protein coding sequence for fatty acid degradation

BBa_K078006
BBa_K078006 Version 1 (Component)
One part of the initial dioxygenase in dioxin degradation pathway

BBa_K729002
BBa_K729002 Version 1 (Component)
Laccase for Polyethylene Degradation

BBa_K1129019
BBa_K1129019 Version 1 (Component)
Complete caffeine synthesis pathway under pTET constitutive promoter

BBa_K1129020
BBa_K1129020 Version 1 (Component)
Complete caffeine synthesis pathway under arabinose-induced promoter

BBa_K1632020
BBa_K1632020 Version 1 (Component)
rbs_CmR(ssrA degradation tag)

BBa_K078003
BBa_K078003 Version 1 (Component)
one part of the initial dioxygenase of the dioxin degradation pathway

BBa_C100017
BBa_C100017 Version 1 (Component)
Myrcene Synthase (B0034 optimized)

LAA
BBa_M0042 Version 1 (Component)
LAA degradation tag

BBa_K1399001
BBa_K1399001 Version 1 (Component)
RFP from Discosoma striata (coral) with LVA-ssrA degradation tag

BBa_K1834845
BBa_K1834845 Version 1 (Component)
Xylene Sensor!

BBa_K861030
BBa_K861030 Version 1 (Component)
FadB, gene for fatty acid degradation from E.coli K12

AAV
BBa_M0044 Version 1 (Component)
AAV degradation tag

LVA
BBa_M0040 Version 1 (Component)
LVA degradation tag

ASV
BBa_M0046 Version 1 (Component)
ASV degradation tag

BBa_K2032001
BBa_K2032001 Version 1 (Component)
Fructose Pathway

Complete C
BBa_K1088061 Version 1 (Component)
Strong Promoter + Strong RBS + I-E Cascade