Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J23110BBa_J23110 Version 1 (Component)constitutive promoter family member
amilCPBBa_K592009 Version 1 (Component)amilCP, blue chromoprotein
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_J23116BBa_J23116 Version 1 (Component)constitutive promoter family member
BBa_J23104BBa_J23104 Version 1 (Component)constitutive promoter family member
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_J23109BBa_J23109 Version 1 (Component)constitutive promoter family member
BBa_K1026011BBa_K1026011 Version 1 (Component)Constitutively Expressed Blue Light Sensor Operon
BBa_J23118BBa_J23118 Version 1 (Component)constitutive promoter family member
BFPBBa_K592100 Version 1 (Component)Blue Fluorescent Protein (mTagBFP)
BBa_J23113BBa_J23113 Version 1 (Component)constitutive promoter family member
BBa_K592020BBa_K592020 Version 1 (Component)PFixK2-lambda C1-B0034-amilCP blue light sensor output
BBa_J23105BBa_J23105 Version 1 (Component)constitutive promoter family member
BBa_K1026005BBa_K1026005 Version 1 (Component)Constitutively Expressed Red Light Sensor Operon
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
Lov-tetRBBa_K785000 Version 1 (Component)Lov-tetR (light sensor with Ptet repression) light->PtetO repressed
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_J23107BBa_J23107 Version 1 (Component)constitutive promoter family member
aeBlueBBa_K864401 Version 1 (Component)aeBlue blue chromoprotein
BBa_K786002BBa_K786002 Version 1 (Component)Sensory rhodopsin II (SRII) with HtrII & Tar, sensitive to blue-green light
BBa_J23103BBa_J23103 Version 1 (Component)constitutive promoter family member
BBa_J23115BBa_J23115 Version 1 (Component)constitutive promoter family member
BBa_J23117BBa_J23117 Version 1 (Component)constitutive promoter family member
BBa_J23108BBa_J23108 Version 1 (Component)constitutive promoter family member
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_K1026000BBa_K1026000 Version 1 (Component)Constitutively Expressed dCas9 Operon
BBa_K360021BBa_K360021 Version 1 (Component)LovTAP: Blue Light Photosensor and Transcriptional Regulator
BBa_K1026014BBa_K1026014 Version 1 (Component)Constitutively Expressed pcyA Operon
BBa_K560000BBa_K560000 Version 1 (Component)Blue Light Sensor+PtrpL+mRFP1
BBa_K568001BBa_K568001 Version 1 (Component)Optogenetical AND-Gate red/blue light
BBa_K322999BBa_K322999 Version 1 (Component)Blue light sensor (lovTAP) + Reporter system
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_K182200BBa_K182200 Version 1 (Component)Constitutively expressed LuxR/LuxI operon