Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K2074005BBa_K2074005 Version 1 (Component)Cry10Aa+2A+Cyt1 expressed in C. reinhardtii
BBa_K2074007BBa_K2074007 Version 1 (Component)Cry11Aa+2A+Cyt1 expressed in C. reinhardtii
BBa_K2074006BBa_K2074006 Version 1 (Component)Cry10Aa+2A+Cyt2 expressed in C. reinhardtii
BBa_K2074003BBa_K2074003 Version 1 (Component)Cry4Aa+2A+Cyt1 expressed in C. reinhardtii
BBa_K2074000BBa_K2074000 Version 1 (Component)Cry11Aa+2A+Cyt2 expressed in C. reinhardtii
BBa_K2074036BBa_K2074036 Version 1 (Component)Cry4Aa+2A+Cyt2 expressed in C. reinhardtii
BBa_K2074004BBa_K2074004 Version 1 (Component)Cry4Aa+2A+Cyt2 expressed in C. reinhardtii
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_K2074029BBa_K2074029 Version 1 (Component)Cry10Aa(Codon optimization)+Extended FMDV 2A+Cyt1(Codon optimization)
BBa_K2074997BBa_K2074997 Version 1 (Component)Cry4Aa and Cyt2 Coexpression in Chlamydomonas reinhardtii
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_K2074031BBa_K2074031 Version 1 (Component)Cry11Aa(Codon optimization)+Extended FMDV 2A+Cyt1(Codon optimization)
BBa_K2074030BBa_K2074030 Version 1 (Component)Cry10Aa(Codon optimization)+Extended FMDV 2A+Cyt2(Codon optimization)
BBa_K309020BBa_K309020 Version 1 (Component)eCFP (for use in C. elegans chassis)
BBa_K2074027BBa_K2074027 Version 1 (Component)Cry4Aa(Codon optimization)+Extended FMDV 2A+Cyt1(Codon optimization)
BBa_K2074032BBa_K2074032 Version 1 (Component)Cry11Aa(Codon optimization)+Extended FMDV 2A+Cyt2(Codon optimization)
BBa_K309012BBa_K309012 Version 1 (Component)Unc-54 3' UTR (for use in C. elegans chassis)
BBa_K2074028BBa_K2074028 Version 1 (Component)Cry4Aa(Codon optimization)+Extended FMDV 2A+Cyt2(Codon optimization)
BBa_K2074015BBa_K2074015 Version 1 (Component)TaV 2A for Chlamydomonas reinhardtii
BBa_K2074016BBa_K2074016 Version 1 (Component)*FMDV 2A(Non-functional) forChlamydomonas reinhardtii
BBa_K2074998BBa_K2074998 Version 1 (Component)cry11Aa suit for Chlamydomonas reinhardti
BBa_K2074014BBa_K2074014 Version 1 (Component)Extended FMDV 2A for Chlamydomonas reinhardtii
BBa_K535000BBa_K535000 Version 1 (Component)HydEF -> C. reinhardtii
BBa_K2074019BBa_K2074019 Version 1 (Component)Terminator of Chlamydomonas reinhardtii
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K2074034BBa_K2074034 Version 1 (Component)Cry11Aa(Codon optimization)+2A+EGFP(Codon optimization)
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
CBDcipABBa_K1615111 Version 1 (Component)CBDcipA with N and C-terminal linker in RFC25
RFC105 ZBBa_K1362421 Version 1 (Component)C-terminal stop overhang TAAT=STOP+1/3Stop RFC[105] overhang Z
BBa_K2050421BBa_K2050421 Version 1 (Component)Thosea Asigna Virus 2A peptide linker (T2A)
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
NpuDnaE(C)BBa_K1362401 Version 1 (Component)NpuDnaE C-Intein cloning piece
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
PcarBBa_K861171 Version 1 (Component)Pcar, synthetic promoter repressed by CRP
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1159201BBa_K1159201 Version 1 (Component)Splitted and engineered C-terminal FbaB for isopeptide bound formation (SpyTag) in RFC[25]
cry11AaBBa_K332011 Version 1 (Component)Crystal protein gene (cry11Aa) from Bacillus thuringiensis subsp. Israelensis.
BBa_K115017BBa_K115017 Version 1 (Component)RNA thermometer (ROSE 32??C)
virABBa_K389010 Version 1 (Component)VirA receptor (expressed)