Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1059005BBa_K1059005 Version 1 (Component)DNA segment whose transcript can prevent mRNA degradation by RNaseE.
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_K1059006BBa_K1059006 Version 1 (Component)DNA segment whose transcript can prevent mRNA degradation by RNaseE in two state .
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
//dnadna Version 1 (Collection) CatBBa_I14033 Version 1 (Component)P(Cat)
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_K1059003BBa_K1059003 Version 1 (Component)Its transcript can prevent the mRNA itself from being degraded by RNaseE.
Lock 1BBa_J01010 Version 1 (Component)Riboregulator Lock 1
BBa_K115003BBa_K115003 Version 1 (Component)RNA thermometer (PrfA)
BBa_K346000BBa_K346000 Version 1 (Component)RBS(B0032)+T3 DNA-directed RNA polymerase
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
DnaABO_9088 Version 1 (Component) BBa_K1059004BBa_K1059004 Version 1 (Component)Its transcript can prevent the mRNA itself from being degraded by exonuclease.
BBa_K737023BBa_K737023 Version 1 (Component)Promoter that can be induced by phosphate.
BBa_J23009BBa_J23009 Version 1 (Component)[key3d] riboregulator for lock3 variants
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
Key 1BBa_J01008 Version 1 (Component)Riboregulator key 1
BBa_K737026BBa_K737026 Version 1 (Component)Promoter that can be induced by phosphate and carbon starvation.
BBa_K115017BBa_K115017 Version 1 (Component)RNA thermometer (ROSE 32??C)
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites
BBa_K1450012BBa_K1450012 Version 1 (Component)T7 RNA Polymerase and DNA Polymerase
BBa_K199045BBa_K199045 Version 1 (Component)CUACC tRNA Suppressor (Produces Serine)
T7polBBa_K145001 Version 1 (Component)T7 RNA polymerase
Y taRNABBa_K606034 Version 1 (Component)Tyrosine amber supressor tRNA
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
BBa_K165006BBa_K165006 Version 1 (Component)Zif268-HIV DNA-binding domain
BBa_K199048BBa_K199048 Version 1 (Component)CCACC tRNA Suppressor (Produces Serine)
BBa_J23070BBa_J23070 Version 1 (Component)Ser2 derived key
Lock3BBa_J01080 Version 1 (Component)Lock3
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_K199002BBa_K199002 Version 1 (Component)CCACU tRNA Suppressor (Produces Serine)
BBa_K737058BBa_K737058 Version 1 (Component)Spot42 is a multitarget small RNA that mediates the discoordinate expression of the E.coli galactose
BBa_J23078BBa_J23078 Version 1 (Component)[lock3i]