Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K318521BBa_K318521 Version 1 (Component)Encryption Lysis - pLock Lysis p(pH) Hin pBile Cre pCons ramA
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
BBa_K112808BBa_K112808 Version 1 (Component)Enterobacteria phage T4 Lysis Device - no promoter
PspaSPspaS_core Version (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
CatBBa_I14033 Version 1 (Component)P(Cat)
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
BBa_K823003BBa_K823003 Version 1 (Component)P<sub>veg</sub>
RhIBBa_I14017 Version 1 (Component)P(Rhl)
BBa_K358006BBa_K358006 Version 1 (Component)lambda lysis cassette with terminator
LysisBBa_K137126 Version 1 (Component)Lambda Lysis Cassette
Lock 1BBa_J01010 Version 1 (Component)Riboregulator Lock 1
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
rhlRBBa_C0071 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
rhIRBBa_C0171 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)
LysisBBa_K836009 Version 1 (Component)Lysis device for R. opacus
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
BBa_K318519BBa_K318519 Version 1 (Component)Bile Salt Induced Lysis Cassette
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K1022123BBa_K1022123 Version 1 (Component)pTet: cI: TT : pcI: Ulp : Lysis
BBa_K912033BBa_K912033 Version 1 (Component)pH Inducible Lysis System(ns)
BBa_K912031BBa_K912031 Version 1 (Component)pH Inducible Lysis System(m)
BBa_K912030BBa_K912030 Version 1 (Component)pH Inducible Lysis System(w)
BBa_K912032BBa_K912032 Version 1 (Component)pH Inducible Lysis System(s)
lysSBO_32709 Version 1 (Component) LysSBO_26894 Version 1 (Component) lysinBBa_S03332 Version 1 (Component)--Specify Parts List--
BlaBBa_I14018 Version 1 (Component)P(Bla)
BBa_K358004BBa_K358004 Version 1 (Component)lambda lysis cassette[SRRz/Rz1]
pCon 0.36BBa_K176009 Version 1 (Component)constitutive promoter family member J23107 actual sequence (pCon 0.36)
phaC1-A-B1BBa_K934001 Version 1 (Component)phaC1-A-B1 [P(3HB) synthesis]
BBa_K741014BBa_K741014 Version 1 (Component)pRM-RBS-lysis-T