Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Scar 25
BBa_B0105 Version 1 (Component)
RFC 25 Scar Sequence

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

Scar25 ATG
BBa_K1319106 Version 1 (Component)
RFC 25 Translation Start Scar Sequence

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

RFC 37
BBa_K245009 Version 1 (Component)
RFC 37 Scar Sequence

BBa_K1321005
BBa_K1321005 Version 1 (Component)
Synthetic Phytochelatin EC(20) RFC[25]

mCherry
BBa_J06505 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_K1321337
BBa_K1321337 Version 1 (Component)
sfGFP in Freiburg format (RFC 25)

BBa_K2170204
BBa_K2170204 Version 1 (Component)
Enhanced monomeric avidin (eMA) in RFC[25]

BBa_K1051000
BBa_K1051000 Version 1 (Component)
Stop codon free RFP in RFC[23] standard

BBa_K1321339
BBa_K1321339 Version 1 (Component)
CBDcenA+Linker, RFC 25 standard

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

BBa_K1321009
BBa_K1321009 Version 1 (Component)
Nickel Binding Protein (NiBP) Freiburg format (RFC[25])

BBa_K1321011
BBa_K1321011 Version 1 (Component)
SmtA metallothionein in Freiburg format (RFC[25])

BBa_K2170205
BBa_K2170205 Version 1 (Component)
Single chain avidin (scAvidin) in RFC[25]

BBa_K1321012
BBa_K1321012 Version 1 (Component)
fMT metallothionein in Freiburg format (RFC[25])

BBa_K1321342
BBa_K1321342 Version 1 (Component)
sfGFP fused to CBDcex in RFC 25

BBa_K1321341
BBa_K1321341 Version 1 (Component)
sfGFP fused to CBDclos in RFC 25

BBa_K1159001
BBa_K1159001 Version 1 (Component)
NanoLuc Luciferase in RFC[25]

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

BBa_K1321349
BBa_K1321349 Version 1 (Component)
CBDcex fused to sfGFP in RFC 25

BBa_K1321343
BBa_K1321343 Version 1 (Component)
NiBP fused to CBDclos in RFC 25

BBa_K1321344
BBa_K1321344 Version 1 (Component)
NiBP fused to CBDcex in RFC 25

BBa_K1321346
BBa_K1321346 Version 1 (Component)
CBDclos fused to sfGFP in RFC 25

BBa_K2170001
BBa_K2170001 Version 1 (Component)
Secretory eukaryotic biotin binding receptor with enhanced monomeric avidin

BBa_K2170050
BBa_K2170050 Version 1 (Component)
Secretory prokaryotic biotin binding receptor with enhanced monomeric avidin

BBa_K1159302
BBa_K1159302 Version 1 (Component)
Enhanced Cyan Fluorescent Protein (eCFP) in RFC[25]

BBa_K1159201
BBa_K1159201 Version 1 (Component)
Splitted and engineered C-terminal FbaB for isopeptide bound formation (SpyTag) in RFC[25]

BBa_K1321347
BBa_K1321347 Version 1 (Component)
dCBD with N-terminal linker in RFC 25

BBa_K1159993
BBa_K1159993 Version 1 (Component)
25/25 Assembly Scar

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1321348
BBa_K1321348 Version 1 (Component)
sfGFP fused to dCBD with linker in RFC 25

BBa_K1321345
BBa_K1321345 Version 1 (Component)
NiBP fused to dCBD with linker in RFC 25

BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

BBa_K1051004
BBa_K1051004 Version 1 (Component)
Stop codon free mOrange in RFC[23] standard

BBa_K648013
BBa_K648013 Version 1 (Component)
GFP with Standard 25 Prefix/Suffix

BBa_K1159303
BBa_K1159303 Version 1 (Component)
Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

RFC 37
BBa_K245119 Version 1 (Component)
P2

BBa_K1321351
BBa_K1321351 Version 1 (Component)
CBDcenA with linker fused to NiBP in Freiburg format (RFC 25)

ECFP
BBa_E0024 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP