iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
FurBO_11498 Version 1 (Component) mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_M36667BBa_M36667 Version 1 (Component)FNR-dependent Hypoxia Sensor
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_M36665BBa_M36665 Version 1 (Component)Hypoxia Sensor
BBa_M36664BBa_M36664 Version 1 (Component)Hypoxia Sensor
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
NFkBBBa_J52010 Version 1 (Component)NFkappaB-dependent promoter
BBa_K2170040BBa_K2170040 Version 1 (Component)Hypoxia sensor (1x HRE_Mini P_BM40_NanoLuc_StrepTag_PolyA)
FnrBO_9039 Version 1 (Component) BBa_K1456004BBa_K1456004 Version 1 (Component)Hypoxia Response Element(HRE)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K387003BBa_K387003 Version 1 (Component)PfdhF: fdhF promoter, a hypoxia inducible promoter
Subtilin PBBa_K104001 Version 1 (Component)Sensor for small peptide Subtilin
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
BBa_K1720002BBa_K1720002 Version 1 (Component)Hypoxia-induced promotor
BBa_K1092006BBa_K1092006 Version 1 (Component)Voltage sensor peptide
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_J13023BBa_J13023 Version 1 (Component)3OC6HSL+LuxR dependent POPS/RIPS generator
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K2170132BBa_K2170132 Version 1 (Component)C-terminal intermediate of eukaryotic hypoxie sensor (VEGF-p2A-PDGF_polyA) in RFC[10]
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_J49001BBa_J49001 Version 1 (Component)Testosterone dependent promoter for species Bicyclus Bicyclus
BBa_J13040BBa_J13040 Version 1 (Component)pOmpR dependent 3OC6HSL sender device
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_I746100BBa_I746100 Version 1 (Component)AIP sensor infrastructure (agrC + agrA from S. aureus with RBSes)
BBa_K592020BBa_K592020 Version 1 (Component)PFixK2-lambda C1-B0034-amilCP blue light sensor output
BBa_K549039BBa_K549039 Version 1 (Component)fur is an iron-dependent regulator from N. meningitidis
BBa_K174015BBa_K174015 Version 1 (Component)Cadmium Sensor
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
fNRBO_32147 Version 1 (Component)