iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
FurBO_11498 Version 1 (Component) BBa_K1884006BBa_K1884006 Version 1 (Component)Ferredoxin-NADP(+)Reductase(FNR)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_K857001BBa_K857001 Version 1 (Component)NADH: Ferredoxin Oxidoreductase
nadEBBa_K1373000 Version 1 (Component)This part encodes NAD synthetase
FnrBO_9039 Version 1 (Component) REDOXBBa_K1312006 Version 1 (Component)NADPH-dependent flavinoid reductase relate to Met-DMSP byosynthesis pathway(REDOX)
BBa_K1998011BBa_K1998011 Version 1 (Component)Ferredoxin-FNR
BBa_K1813010BBa_K1813010 Version 1 (Component)A. gamb NADPH Reductase
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K1975003BBa_K1975003 Version 1 (Component)PhaB - NADPH-dependent acetoacetyl-CoA reductase
BBa_K896007BBa_K896007 Version 1 (Component)Nap( Nitrate->Nitrite reductase)
BBa_K1497010BBa_K1497010 Version 1 (Component)Dihydroflavonol 4-reductase (DFR)
BBa_K2103000BBa_K2103000 Version 1 (Component)CYP2e1/NADPH P450 Reductase
BBa_K2103001BBa_K2103001 Version 1 (Component)NADPH P450 Reductase (Homo Sapiens)
BBa_K1043007BBa_K1043007 Version 1 (Component)PhaB; Acetoacetyl-CoA Reductase (NADPH dependent)
GRE3BBa_K1602004 Version 1 (Component)Aldose reductase (GRE3) from Saccharomyces cerevisiae S288c
fdxBBa_K826011 Version 1 (Component)Ferredoxin
rubBBBa_K398004 Version 1 (Component)Rubredoxin reductase (Gordonia sp. TF6)
BioplasticBBa_K156013 Version 1 (Component)phaB1 (acetyacetyl-CoA reductase)
BBa_K936010BBa_K936010 Version 1 (Component)Glycoaldehyde Reductase (anaerobic)
BBa_K539711BBa_K539711 Version 1 (Component)ilvC (ketol-acid reductoisomerase NAD(P)-binding)
BBa_M36923BBa_M36923 Version 1 (Component)Ferredoxin producing gene
BBa_K1523024BBa_K1523024 Version 1 (Component)Coding for Cr reductase
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K535003BBa_K535003 Version 1 (Component)FeOx -> Clostridium acetobutylicum???s ferredoxin
BBa_K216006BBa_K216006 Version 1 (Component)pentaerythritol tetranitrate reductase with native rbs
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
NadBBO_26552 Version 1 (Component) nadABO_28792 Version 1 (Component) NadABO_26550 Version 1 (Component) nrdPBBa_K847211 Version 1 (Component)nrd operon promoter
nadBBO_32600 Version 1 (Component) NadCBO_26551 Version 1 (Component) nadEBO_33020 Version 1 (Component) nadBBO_2839 Version 1 (Component) BBa_K118015BBa_K118015 Version 1 (Component)glgC coding sequence encoding ADP-glucose pyrophosphorylase
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions