Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_I13507
BBa_I13507 Version 1 (Component)
Screening plasmid intermediate

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

GFP1
BBa_I715019 Version 1 (Component)
Amino Half of GFP (aka GFP1)

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

GFP2
BBa_I715020 Version 1 (Component)
Carboxyl Half of GFP (aka GFP2)

BBa_M31373
BBa_M31373 Version 1 (Component)
First Half of M13K07 g3

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_M31554
BBa_M31554 Version 1 (Component)
M13108 +M13508 + M13008 + M13103 + M13503

BBa_M31552
BBa_M31552 Version 1 (Component)
M13105 + M13505 + M13005 + M13507

BBa_M31378
BBa_M31378 Version 1 (Component)
M13K07 g8 ORF -Promoter g3

BBa_J100021
BBa_J100021 Version 1 (Component)
First Half of PyrE

bl
BBa_I10013 Version 1 (Component)
first half of BBa_I10003

BBa_J100018
BBa_J100018 Version 1 (Component)
First Half of AspC gene

BBa_J100025
BBa_J100025 Version 1 (Component)
First half of CAT gene

BBa_J100019
BBa_J100019 Version 1 (Component)
First half of ilvE gene

BBa_M300051
BBa_M300051 Version 1 (Component)
m13k07

BBa_M13507
BBa_M13507 Version 1 (Component)
M13KO7 gene VII RBS

BBa_M31372
BBa_M31372 Version 1 (Component)
Second Half of M13K07 g2 -Promoter g5 -RBS g5

BBa_I715004
BBa_I715004 Version 1 (Component)
Amino Half of of Kanamycin (Kan1)

BBa_I715005
BBa_I715005 Version 1 (Component)
Carboxyl Half of Kanamycin (Kan2)

BBa_M13007
BBa_M13007 Version 1 (Component)
M13K07 gene VII

BBa_M300052
BBa_M300052 Version 1 (Component)
m13k07 - Gene 3

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

BBa_M31519
BBa_M31519 Version 1 (Component)
Modified promoter sequence of g3.

BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins

RFP2
BBa_I715023 Version 1 (Component)
Carboxyl portion of RFP

BBa_M13509
BBa_M13509 Version 1 (Component)
M13Ko7 gene IX RBS

CreA
BBa_I715000 Version 1 (Component)
Amino Half of Cre Recombinase (aka CreA)

CreB
BBa_I715001 Version 1 (Component)
Carboxl Half of Cre Recombinase (aka CreB)

BBa_I13907
BBa_I13907 Version 1 (Component)
Ring Oscillator Synchronization Device (lac)

BBa_I714031
BBa_I714031 Version 1 (Component)
OriT-R (Origin of Transfer for the R751-plasmid nic region)

BBa_M31951
BBa_M31951 Version 1 (Component)
part of Gene II of M13K07

BBa_M31333
BBa_M31333 Version 1 (Component)
g3 to BamHI site

RFP1
BBa_I715022 Version 1 (Component)
Amino Portion of RFP

BBa_M13108
BBa_M13108 Version 1 (Component)
M13K07 gene VIII promoter