iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_K923001BBa_K923001 Version 1 (Component)Forward Primer for Thermobifida fusca cutinase
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K923000BBa_K923000 Version 1 (Component)Primer for Thermobifida fusca cutinase
BBa_K923002BBa_K923002 Version 1 (Component)Reverse Primer for Thermobifida fusca cutinase
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
PBS_F24PBS_F24 Version 1 (Component) VF2BBa_G00100 Version 1 (Component)Forward primer for sequencing/amplifying BioBrick parts (VF2)
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
BBa_M11032BBa_M11032 Version 1 (Component)Cellobiohydrolase [Thermobifida fusca YX]
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K1582028BBa_K1582028 Version 1 (Component)Thc_Cut1: Cutinase 1 from Thermobifida Cellulosilytica
BBa_K936000BBa_K936000 Version 1 (Component)LC Cutinase
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_G00700BBa_G00700 Version 1 (Component)Forward primer for I0500 (pBAD)
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_K808025BBa_K808025 Version 1 (Component)FsC: Cutinase PET cleaving enzyme
CFP/YFP-fBBa_G00200 Version 1 (Component)Forward primer for sequencing composite parts; binds to CFP/YFP (BBa_E0020/22, BBa_E0030/32)
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K187033BBa_K187033 Version 1 (Component)pAB/BA forward primer for sequencing
BBa_K2184039BBa_K2184039 Version 1 (Component)Forward primer
BBa_K936013BBa_K936013 Version 1 (Component)pelB-LC-Cutinase fusion protein
BBa_G00400BBa_G00400 Version 1 (Component)Forward Primer to C0040
BBa_K1639017BBa_K1639017 Version 1 (Component)pColA Forward Primer
BBa_K1443003BBa_K1443003 Version 1 (Component)RFP Binding Forward Primer for Backbone Amplification
BBa_K496000BBa_K496000 Version 1 (Component)Forward primer for visualizing restriction enzyme digestion.
BBa_I749001BBa_I749001 Version 1 (Component)bchB forward primer
BBa_K731500BBa_K731500 Version 1 (Component)[LacI + LacIq promoter] reverse + [tac promoter + lac operator] forward
BBa_G00520BBa_G00520 Version 1 (Component)Forward Primer to C0052
BBa_G00120BBa_G00120 Version 1 (Component)Forward Primer to C0012
BBa_G00530BBa_G00530 Version 1 (Component)Forward Primer to C0053
BBa_G00600BBa_G00600 Version 1 (Component)Forward Primer to C0060
BBa_G00510BBa_G00510 Version 1 (Component)Forward Primer to C0051