iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
VF2BBa_G00100 Version 1 (Component)Forward primer for sequencing/amplifying BioBrick parts (VF2)
Suffix-FBBa_G1000 Version 1 (Component)Forward primer for amplifying BioBrick plasmid backbones by PCR (Suffix-f)
Suffix-FBBa_G1002 Version 1 (Component)Forward primer for amplifying BioBrick plasmid backbones by PCR (Suffix-f)
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
Prefix-RBBa_G1001 Version 1 (Component)Reverse primer for amplifying BioBrick plasmid backbones by PCR (Prefix-r)
Prefix-RBBa_G1003 Version 1 (Component)Reverse primer for amplifying BioBrick plasmid backbones by PCR (Prefix-r)
FurBO_11498 Version 1 (Component) BioBrick-fBBa_G1004 Version 1 (Component)Forward BioBrick prefix primer for amplifying BioBrick parts (BioBrick-f)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
PBS_F24PBS_F24 Version 1 (Component) BioBrick-rBBa_G1005 Version 1 (Component)Reverse BioBrick suffix primer for amplifying BioBrick parts (BioBrick-r)
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
BBa_K1321300BBa_K1321300 Version 1 (Component)pSEVA331-Bb - pSEVA331 with biobrick prefix and suffix
BBa_I13452BBa_I13452 Version 1 (Component)Adds another BioBrick site
VRBBa_G00101 Version 1 (Component)Reverse primer for sequencing/amplifying BioBrick parts (VR)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K648013BBa_K648013 Version 1 (Component)GFP with Standard 25 Prefix/Suffix
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
VRBBa_G00102 Version 1 (Component)Reverse BioBrick primer annealing site (VR binding site)
F plasmidBBa_I50000 Version 1 (Component)F plasmid backbone with BioBrick sites removed.
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
OriTFBBa_J01002 Version 1 (Component)OriT-F (Origin of Transfer for the F-plasmid nic region)
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
BBa_I50001BBa_I50001 Version 1 (Component)F plasmid backbone with BioBrick sites removed, reverse
PcarBBa_K861171 Version 1 (Component)Pcar, synthetic promoter repressed by CRP
BBa_K590086BBa_K590086 Version 1 (Component)pGA Suffix, forward primer
BBa_K371050BBa_K371050 Version 1 (Component)MSF(meta-suffix)
PucRBO_11500 Version 1 (Component) BBa_K1443003BBa_K1443003 Version 1 (Component)RFP Binding Forward Primer for Backbone Amplification
BBa_I714030BBa_I714030 Version 1 (Component)OriT-F (Origin of Transfer for the F-plasmid nic region)