Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
"G"BBa_K1080009 Version 1 (Component)ChlG
BBa_J17001BBa_J17001 Version 1 (Component)G-alpha-olf
BBa_J17003BBa_J17003 Version 1 (Component)G-alpha-olf
BBa_I732092BBa_I732092 Version 1 (Component)Double Repoters (LacZ-alpha and RFP)
RFC105 ABBa_K1362414 Version 1 (Component)N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A
BBa_J17002BBa_J17002 Version 1 (Component)G-alpha-olf Protein Squence
BBa_K539714BBa_K539714 Version 1 (Component)kivd (alpha-ketoisovalerate decarboxylase)
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
BAT2BBa_J45008 Version 1 (Component)branched-chain amino acid transaminase (BAT2); converts leucine to alpha-ketoisocaproate
lacZ aBBa_E0033 Version 1 (Component)LacZ alpha fragment; complements matching N-terminal deletion mutant (lacZ-omega)
NAGABBa_K1483000 Version 1 (Component)α-N-Acetylgalactosamindase
eYFP_SH3 gBBa_K1602041 Version 1 (Component)Inducible generator of eYFP with C-terminal SH3 ligand
BBa_K517002BBa_K517002 Version 1 (Component)alpha-pinene synthase
BBa_I732018BBa_I732018 Version 1 (Component)lacZ alpha fragment (RBS+ TERM-)
BBa_K823042BBa_K823042 Version 1 (Component)PsspK promoter regulated by sigma G
BBa_K539713BBa_K539713 Version 1 (Component)AlsS (alpha-acetolactate synthase protein)
BBa_K299107BBa_K299107 Version 1 (Component)T.xbaI.G (T followed by xbaI site and additional G to behave like biobrick prefix after xbaI digest)
GBBa_G0011 Version 1 (Component)The nucleotide G
BBa_I732074BBa_I732074 Version 1 (Component)Promoter Adaptor + LacZ-alpha Reporter
3alpha-HSDBBa_K1674001 Version 1 (Component)3alpha-hydroxysteroid dehydrogenase
BBa_K1497031BBa_K1497031 Version 1 (Component)Scaffold (G-S-P-His)
BBa_K195200BBa_K195200 Version 1 (Component)Human alpha-V integrin gene
BBa_E0038BBa_E0038 Version 1 (Component)lacZ alpha
VirA/GBBa_K389017 Version 1 (Component)VirA/G signaling system without read-out
BBa_I732020BBa_I732020 Version 1 (Component)lacZ alpha (fragment RBS+ TERM+)
BBa_K1829007BBa_K1829007 Version 1 (Component)Ste2: ligand receptor of mating factor alpha
BBa_K1497032BBa_K1497032 Version 1 (Component)Scaffold (G-S-P-His-Cys)
pFig2cBBa_K1829002 Version 1 (Component)pFig2c: Mating factor alpha responsive promoter
BBa_K1952013BBa_K1952013 Version 1 (Component)LacZ alpha peptide