Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_M31957BBa_M31957 Version 1 (Component)Gene V of M13K07, modified
BBa_M13105BBa_M13105 Version 1 (Component)M13K07 gene V promoter
BBa_M31554BBa_M31554 Version 1 (Component)M13108 +M13508 + M13008 + M13103 + M13503
BBa_M13005BBa_M13005 Version 1 (Component)M13K07 gene V
BBa_M13505BBa_M13505 Version 1 (Component)M13KO7 gene V RBS
BBa_M31552BBa_M31552 Version 1 (Component)M13105 + M13505 + M13005 + M13507
BBa_M300052BBa_M300052 Version 1 (Component)m13k07 - Gene 3
BBa_M312501BBa_M312501 Version 1 (Component)M13K07 Redesign Gene V
BBa_M31960BBa_M31960 Version 1 (Component)Gene VII of M13K07 modified
BBa_M31252BBa_M31252 Version 1 (Component)Redesigned M13K07 Gene V Upstream
BBa_K195200BBa_K195200 Version 1 (Component)Human alpha-V integrin gene
BBa_M31954BBa_M31954 Version 1 (Component)Gene X, M13K07 modified
BBa_M31966BBa_M31966 Version 1 (Component)Gene VIII, M13K07 modified
BBa_M31981BBa_M31981 Version 1 (Component)M13K07 gene 5 modified
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_M31980BBa_M31980 Version 1 (Component)gene 7 from M13K07 modified
BBa_M31978BBa_M31978 Version 1 (Component)gene 9 from M13K07 modified
BBa_M31533BBa_M31533 Version 1 (Component)This is gene V of M13K07 (Promoter, RBS, and ORF)
BBa_M13508BBa_M13508 Version 1 (Component)M13K07 gene VIII RBS
BBa_M13009BBa_M13009 Version 1 (Component)M13K07 gene IX
BBa_M13007BBa_M13007 Version 1 (Component)M13K07 gene VII
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_M13108BBa_M13108 Version 1 (Component)M13K07 gene VIII promoter
BBa_M13507BBa_M13507 Version 1 (Component)M13KO7 gene VII RBS
BBa_M13509BBa_M13509 Version 1 (Component)M13Ko7 gene IX RBS
BBa_M13503BBa_M13503 Version 1 (Component)M13K07 gene III RBS
BBa_M31951BBa_M31951 Version 1 (Component)part of Gene II of M13K07
BBa_M13103BBa_M13103 Version 1 (Component)M13K07 gene III promoter
BBa_M13002BBa_M13002 Version 1 (Component)M13K07 gene II
BBa_M13003BBa_M13003 Version 1 (Component)M13K07 gene III
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_M13102BBa_M13102 Version 1 (Component)M13K07 gene II promoter
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_J22101BBa_J22101 Version 1 (Component)Lac Y gene
BBa_M13510BBa_M13510 Version 1 (Component)M13KO7 gene X RBS