Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I763029BBa_I763029 Version 1 (Component)Genetic Schmitt Trigger
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
BBa_K2070023BBa_K2070023 Version 1 (Component)Constitutive Toehold Trigger generator
BBa_K415210BBa_K415210 Version 1 (Component)Temporary cymR Stochastic Trigger
BBa_K2070017BBa_K2070017 Version 1 (Component)Arabinose Inducible Toehold Trigger generator
BBa_K2070007BBa_K2070007 Version 1 (Component)Toehold Trigger Inducible GFP generator
BBa_I711005BBa_I711005 Version 1 (Component)Melanogenesis with red light trigger
BBa_I3102BBa_I3102 Version 1 (Component)AraC trigger device (R1075.I3700)
BBa_I3112BBa_I3112 Version 1 (Component)Test: AraC trigger (I3102.E0422)
BBa_I3110BBa_I3110 Version 1 (Component)Test: Lac trigger (I3100.E0422)
BBa_I3111BBa_I3111 Version 1 (Component)Test: TetR trigger (I3101.E0422)
BBa_K174011BBa_K174011 Version 1 (Component)IPTG inducable kinA Bacillus sporulation trigger
BBa_K748003BBa_K748003 Version 1 (Component)yddV is a Diguanylate Cyclase-Genomic.
BBa_I2023BBa_I2023 Version 1 (Component)Full Heat Trigger Test (R1075.Q04811.E0432)
BBa_K1820003BBa_K1820003 Version 1 (Component)P335-Φ31phage genetic switch-divergent promoter + native RBS
BBa_K301010BBa_K301010 Version 1 (Component)Self-induction Genetic Circuit
BBa_I3101BBa_I3101 Version 1 (Component)TetR trigger device (R1075.B0034.C0040.B0015.R0040)
BBa_K1718002BBa_K1718002 Version 1 (Component)Genetic Switch for Bxb1 invertase
BBa_K575020BBa_K575020 Version 1 (Component)Genomic LasR/PAI1 Inducible Promoter (Long)
BBa_K365013BBa_K365013 Version 1 (Component)ClpX trimer
YAP1BBa_K813000 Version 1 (Component)YAP1 - Yeast Genomic IRES
BBa_K813002BBa_K813002 Version 1 (Component)HAP4 - Yeast Genomic IRES
BBa_K813001BBa_K813001 Version 1 (Component)URE2 - Yeast Genomic IRES
BBa_I3100BBa_I3100 Version 1 (Component)Lac stochastic trigger device (R1075.B0034.C0012.B0015.R0010)
BBa_K575021BBa_K575021 Version 1 (Component)Genomic LasR/PAI1 Inducible Promoter (Short)
BBa_K1366002BBa_K1366002 Version 1 (Component)Genetic construct for lpp gen deletion
BBa_K575040BBa_K575040 Version 1 (Component)Genomic LasR/PAI1 Inducible Promoter + RBS (B0034) + GFP
BBa_K1718006BBa_K1718006 Version 1 (Component)Genetic Switch LuxI GFP
BBa_K1366022BBa_K1366022 Version 1 (Component)Genetic construct for msbB gen deletion
p2001BBa_K1820002 Version 1 (Component)P335-Φ31phage genetic switch-divergent promoter
BBa_K1366021BBa_K1366021 Version 1 (Component)Genetic construct for lpp gen deletion
BBa_K208038BBa_K208038 Version 1 (Component)Lac Promoter/RBS/GeneIII/PhaP/Terminator
BBa_K540003BBa_K540003 Version 1 (Component)rcn-OmpR234, device that triggers adherence in response to cobalt.
BBa_K156030BBa_K156030 Version 1 (Component)Genetic attenuator measurement device (template)
BBa_K1366001BBa_K1366001 Version 1 (Component)Genetic construct for lpp gen deletion
BBa_K1366000BBa_K1366000 Version 1 (Component)Genetic construct for lpp gen deletion
BBa_K1366102BBa_K1366102 Version 1 (Component)Genetic construct for msbB gene deletion (C2)
BBa_K156028BBa_K156028 Version 1 (Component)Genetic attenuator (synthetic transciption terminator) ~45% efficient
BBa_K156029BBa_K156029 Version 1 (Component)Genetic attenuator (synthetic transcription terminator) ~17% efficient
BBa_K156027BBa_K156027 Version 1 (Component)Genetic attenuator (synthetic transcription terminator) ~68% efficient
LSSLBBa_K2026000 Version 1 (Component)LSSL, a composite part acts as genetic switch
BBa_K575023BBa_K575023 Version 1 (Component)Genomic RhlR/PAI2 Inducible Promoter (short)