Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
ATGATG Version 1 (Component) HABBa_I712008 Version 1 (Component)HA affinity tag
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
CatBBa_I14033 Version 1 (Component)P(Cat)
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
NLSBBa_J176008 Version 1 (Component)NLS
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
HATBBa_M0033 Version 1 (Component)HAT affinity tag
c-MycBBa_I712007 Version 1 (Component)c-Myc affinity tag
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
HABBa_K128001 Version 1 (Component)HA affinity tag
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
3x FLAGBBa_J64005 Version 1 (Component)3x FLAG affinity tag
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
T7BBa_M0028 Version 1 (Component)T7 affinity tag
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
Tat PROMBBa_K895000 Version 1 (Component)Eco_Ptat2
IMPACTBBa_M0026 Version 1 (Component)IMPACT affinity tag
BiotinBBa_M0024 Version 1 (Component)Biotin affinity tag
FLAGBBa_M0022 Version 1 (Component)FLAG affinity tag
HisBBa_K128005 Version 1 (Component)His affinity tag
polyABBa_J176009 Version 1 (Component)polyA2
Strep-tagBBa_M0031 Version 1 (Component)Strep-tag II affinity tag
BBa_K1125001BBa_K1125001 Version 1 (Component)Tandem Affinity Purification (TAP) tag
c-MycBBa_M0032 Version 1 (Component)c-Myc affinity tag
Poly-ArgBBa_M0030 Version 1 (Component)Poly-Arginine affinity tag
S-proteinBBa_M0029 Version 1 (Component)S-protein affinity tag
BBa_K1583060BBa_K1583060 Version 1 (Component)Hydroxyapatite affinity tag
FLAGBBa_K128000 Version 1 (Component)FLAG affinity tag