SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
GFP reportBBa_E0240 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
RhlR+C4BBa_R0071 Version 1 (Component)Promoter (RhlR & C4-HSL regulated)
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
cinRBBa_R0078 Version 1 (Component)Promoter (cinR and HSL regulated)
cinRBBa_R0077 Version 1 (Component)Promoter (cinR and HSL regulated, RBS+)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
HSL ReceivBBa_I741001 Version 1 (Component)HSL Receiver Construct
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
BBa_I13263BBa_I13263 Version 1 (Component)Lux Receiver (HSL & R0063 driven)
BBa_J69121BBa_J69121 Version 1 (Component)3OC12-HSL Receiver
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
luxRBBa_R0061 Version 1 (Component)Promoter (HSL-mediated luxR repressor)
rhIIBBa_C0170 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL (no LVA)
EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_Q04510BBa_Q04510 Version 1 (Component)QPI (B0034.C0051.B0015.R0051)
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
SpacerSpacer Version 1 (Component) CouplingCoupling Version 1 (Component)Translational coupler
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
ATGATG Version 1 (Component) MCSMCS Version 1 (Component) eyfpBBa_E0031 Version 1 (Component)EYFP (RBS+ LVA-)
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_E0422BBa_E0422 Version 1 (Component)ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)
BBa_K2033003BBa_K2033003 Version 1 (Component)Isovaleryl-HSL (IV-HSL) Receiver Device - BjaR
BBa_K1670001BBa_K1670001 Version 1 (Component)3OC6-HSL receiver device
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K611013BBa_K611013 Version 1 (Component)pLacI Characterization Construct