SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K1456004
BBa_K1456004 Version 1 (Component)
Hypoxia Response Element(HRE)

Cre
BBa_J61047 Version 1 (Component)
Cre DNA recombinase

pRE
BBa_K116603 Version 1 (Component)
pRE promoter from λ phage

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

HerE
BBa_K1615045 Version 1 (Component)
Heroin Esterase in RFC25

pNFAT
BBa_K838003 Version 1 (Component)
NFAT response element

BBa_I735008
BBa_I735008 Version 1 (Component)
ORE1X Oleate response element

BBa_I735009
BBa_I735009 Version 1 (Component)
ORE2X oleate response element

BBa_K346002
BBa_K346002 Version 1 (Component)
PmerT promoter (mercury-responsive)

BBa_K387003
BBa_K387003 Version 1 (Component)
PfdhF: fdhF promoter, a hypoxia inducible promoter

BBa_K216005
BBa_K216005 Version 1 (Component)
PyeaR promoter, responsive to nitrate, nitrite and nitric oxide

BBa_K1443000
BBa_K1443000 Version 1 (Component)
Blue Light Response Element

BBa_M36665
BBa_M36665 Version 1 (Component)
Hypoxia Sensor

BBa_M36664
BBa_M36664 Version 1 (Component)
Hypoxia Sensor

lexA
BBa_K864201 Version 1 (Component)
LexA SOS response repressor

BBa_K1720002
BBa_K1720002 Version 1 (Component)
Hypoxia-induced promotor

BBa_K346001
BBa_K346001 Version 1 (Component)
RBS (B0034) + MerR (mercury-responsive transcription factor)

BBa_K1456015
BBa_K1456015 Version 1 (Component)
NF-κB (Nuclear Factor kappa B) ROS response element

BBa_M36667
BBa_M36667 Version 1 (Component)
FNR-dependent Hypoxia Sensor

BBa_M36562
BBa_M36562 Version 1 (Component)
Estrogen Response Element- operon that the estrogen receptor beta binds to

BBa_M36042
BBa_M36042 Version 1 (Component)
EfeU elemental iron (II) transporter

BBa_K264001
BBa_K264001 Version 1 (Component)
Modular UP-element Design 2

BBa_K368001
BBa_K368001 Version 1 (Component)
minimal CMV Promoter with TRE (tet responsible element)

BBa_K1321002
BBa_K1321002 Version 1 (Component)
Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25

BBa_K2170040
BBa_K2170040 Version 1 (Component)
Hypoxia sensor (1x HRE_Mini P_BM40_NanoLuc_StrepTag_PolyA)

BBa_K264003
BBa_K264003 Version 1 (Component)
Modular UP-element Design 4

UPcox1
BBa_K809003 Version 1 (Component)
Up elements of cox1 gene

BBa_K1470003
BBa_K1470003 Version 1 (Component)
Woodchuck Hepatitis Virus Posttranscriptional Regulatory Element (WPRE)

BBa_K1045010
BBa_K1045010 Version 1 (Component)
RBS BBa_B0034 with inversed Pre- and Suffix

BBa_M45689
BBa_M45689 Version 1 (Component)
Constitutive promoter with a retinoic acid response element at the end

BBa_K363003
BBa_K363003 Version 1 (Component)
A calcium dependent response element binding site for the Crz1 activator

BBa_K363002
BBa_K363002 Version 1 (Component)
A calcium dependent response element binding site for the Crz1 activator

BBa_K363005
BBa_K363005 Version 1 (Component)
A calcium dependent response element binding site for the Crz1 activator

BBa_K363007
BBa_K363007 Version 1 (Component)
A calcium dependent response element binding site for the Crz1 activator

BBa_K363004
BBa_K363004 Version 1 (Component)
A calcium dependent response element binding site for the Crz1 activator

BBa_K2036004
BBa_K2036004 Version 1 (Component)
ABF2,abscisic acid responsive elements-binding factor 2

BBa_K1321003
BBa_K1321003 Version 1 (Component)
Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25

BBa_K363006
BBa_K363006 Version 1 (Component)
A characterized calcium dependent response element binding site for the Crz1 activator

BBa_K363001
BBa_K363001 Version 1 (Component)
The consensus calcium dependent response element binding site for the Crz1 activator.

cre
BBa_K112102 Version 1 (Component)
Cre enzyme without start or stop codons

pUSPA
BBa_K1620000 Version 1 (Component)
Promoter element UspA

FixJ
BBa_K592005 Version 1 (Component)
FixJ, the response regulator to YF1

BBa_M30109
BBa_M30109 Version 1 (Component)
Light responsive system, dual regulation

BBa_K1315007
BBa_K1315007 Version 1 (Component)
The BCAM0228 Response Regulator from <i>Burkholderia</i>

BBa_K135000
BBa_K135000 Version 1 (Component)
pCpxR (CpxR responsive promoter)

BBa_K1641225
BBa_K1641225 Version 1 (Component)
Invertible element