Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K632002BBa_K632002 Version 1 (Component)INP-Silicatein
BBa_K1890050BBa_K1890050 Version 1 (Component)Silicatein from Suberites domuncula
BBa_T9502BBa_T9502 Version 1 (Component)Silicatein alpha
BBa_K1890051BBa_K1890051 Version 1 (Component)Silicatein from Tethya aurantia
IFPBBa_K256008 Version 1 (Component)Infrared Protein (IFP 1.4)
BBa_K932002BBa_K932002 Version 1 (Component)Silicatein-Alpha OmpA Fusion Protein
BBa_K1890000BBa_K1890000 Version 1 (Component)Silicatein gene with strong RBS
BBa_K1890001BBa_K1890001 Version 1 (Component)Silicatein gene, fused to transmembrane domain of INP, with strong RBS
BBa_K932003BBa_K932003 Version 1 (Component)OmpA-Silicatein-Alpha under Lac promoter
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
TnPBBa_J61023 Version 1 (Component)Tn5 Transposase [Tnp1-PN] (with PstI and NotI)
BBa_K523008BBa_K523008 Version 1 (Component)INP for BioSandwich
BBa_K1890002BBa_K1890002 Version 1 (Component)Silicatein gene, fused to transmembrane domain of OmpA, with strong RBS
BBa_K523013BBa_K523013 Version 1 (Component)Plac + INP-EYFP
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K523020BBa_K523020 Version 1 (Component)Plac + INP-bglX
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
INP-HisBBa_K1933001 Version 1 (Component)INPNC fused to 6xHis tag
IntBO_10061 Version 1 (Component) iepBO_32653 Version 1 (Component) intBO_29308 Version 1 (Component) ispBO_29639 Version 1 (Component) IspBO_10011 Version 1 (Component) BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
xis/intBBa_K112234 Version 1 (Component){rbs.xis.int!} The bacteriophage lambda xis/integrase gene with native rbs and stop codon; assembly
BBa_K197026BBa_K197026 Version 1 (Component)INP-Repeats
pCpcG2 invBBa_K566009 Version 1 (Component)pCpcG2 promoter, inverted sequence (Green light inducible)
BBa_K1890053BBa_K1890053 Version 1 (Component)INP transmembrane domain
BsaI ->BBa_K1362425 Version 1 (Component)BsaI restriction site for RFC[???] cloning (in part in prefix)
BBa_K309020BBa_K309020 Version 1 (Component)eCFP (for use in C. elegans chassis)
Val-IndBBa_K1152006 Version 1 (Component)Valine-Indigoidine fusion - NRPS
HerEBBa_K1615045 Version 1 (Component)Heroin Esterase in RFC25
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)