Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K523020BBa_K523020 Version 1 (Component)Plac + INP-bglX
BBa_C0530BBa_C0530 Version 1 (Component)bglG + cfp-yfp(with bgl-antiterminator)
BBa_K523004BBa_K523004 Version 1 (Component)bglX for BioSandwich
BBa_K523014BBa_K523014 Version 1 (Component)Plac + LacZ + bglX
BglGBBa_C0400 Version 1 (Component)BglG
BBa_K523002BBa_K523002 Version 1 (Component)RBS + bglX (E. coli perisplasmic β-glucosidase)
BBa_C0440BBa_C0440 Version 1 (Component)Terminator (bgl)
IFPBBa_K256008 Version 1 (Component)Infrared Protein (IFP 1.4)
bglPBO_2711 Version 1 (Component) bglABO_32609 Version 1 (Component) BglABO_26864 Version 1 (Component) bglHBO_32587 Version 1 (Component) BglHBO_26846 Version 1 (Component) BglCBO_26937 Version 1 (Component) BBa_K118028BBa_K118028 Version 1 (Component)beta-glucosidase gene bglX (chu_2268) from Cytophaga hutchinsonii
BBa_K902004BBa_K902004 Version 1 (Component)Periplasmic beta-D-glucoside glucohydrolase (bglX)
bglCBO_2710 Version 1 (Component) bglSBO_2712 Version 1 (Component) BBa_K1175006BBa_K1175006 Version 1 (Component)endo-beta-1,3-1,4 glucanase (BglS) from Bacillus Subtilis 168
BBa_K1827001BBa_K1827001 Version 1 (Component)Trichoderma reesei bgl1
BBa_C0430BBa_C0430 Version 1 (Component)RBS(B0034) + bglF
BBa_K561005BBa_K561005 Version 1 (Component)Pvgb+bglX+tetR
BBa_C0410BBa_C0410 Version 1 (Component)Weak RBS (B0032) + BglG
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
TnPBBa_J61023 Version 1 (Component)Tn5 Transposase [Tnp1-PN] (with PstI and NotI)
BBa_M11026BBa_M11026 Version 1 (Component)Beta-glucosidase (bgl 1)
BBa_K523008BBa_K523008 Version 1 (Component)INP for BioSandwich
BBa_K523013BBa_K523013 Version 1 (Component)Plac + INP-EYFP
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_C0470BBa_C0470 Version 1 (Component)Bgl Terminator with yfp reportor
BBa_K902006BBa_K902006 Version 1 (Component)Beta-D-glucoside glucohydrolase (bglX) inducible generator
BBa_K902005BBa_K902005 Version 1 (Component)Beta-D-glucoside glucohydrolase (bglX) constitutive generator
BBa_C0460BBa_C0460 Version 1 (Component)Bgl Terminator with cfp reportor
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K902007BBa_K902007 Version 1 (Component)Beta-D-glucoside glucohydrolase (bglX) with strong RBS
INP-HisBBa_K1933001 Version 1 (Component)INPNC fused to 6xHis tag