Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
RexBO_10687 Version 1 (Component) BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K523019BBa_K523019 Version 1 (Component)Plac + INP-cex
BBa_J15507BBa_J15507 Version 1 (Component)RBS+Cex (Exoglucanase)
BBa_K118022BBa_K118022 Version 1 (Component)cex coding sequence encoding Cellulomonas fimi exoglucanase
BBa_K392007BBa_K392007 Version 1 (Component)C. firmi Cex (Silver standard compatible)
BBa_K105022BBa_K105022 Version 1 (Component)lex A - operator
IFPBBa_K256008 Version 1 (Component)Infrared Protein (IFP 1.4)
BBa_K523024BBa_K523024 Version 1 (Component)cex + cenA fusion (cxnA)
CPXBBa_I728500 Version 1 (Component)CPX Terminal Surface Display Protein with Polystyrene-Binding Peptide
BBa_J07007BBa_J07007 Version 1 (Component)ctx promoter
BBa_K523016BBa_K523016 Version 1 (Component)Plac + RBS + cex (exoglucanase)
BBa_J15510BBa_J15510 Version 1 (Component)Pspac+RBS+cex+RBS+cenA
BBa_J15509BBa_J15509 Version 1 (Component)Plac+RBS+cex+RBS+cenA
BBa_K561004BBa_K561004 Version 1 (Component)PfdhF+cex+cenA+tetR
SP_REXBBa_K809501 Version 1 (Component)REX+SPzim17
pEXBBa_K243033 Version 1 (Component)pEX
BBa_K523025BBa_K523025 Version 1 (Component)Plac + RBS + cxnA (cex + cenA fusion)
REXBBa_K809401 Version 1 (Component)REX coding sequence
BBa_Y1004BBa_Y1004 Version 1 (Component)Cen/Ars
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
P2 coxBBa_K242001 Version 1 (Component)Phage P2 cox transcriptional activator
BBa_J07011BBa_J07011 Version 1 (Component)ToxR promoter (ctx) controlling GFP
TnPBBa_J61023 Version 1 (Component)Tn5 Transposase [Tnp1-PN] (with PstI and NotI)
BBa_K569010BBa_K569010 Version 1 (Component)ctx+CheZ mutant
BBa_K569015BBa_K569015 Version 1 (Component)ctx+ToxR+FGFR
BBa_I728200BBa_I728200 Version 1 (Component)CPX Display Mechanism
BBa_K523008BBa_K523008 Version 1 (Component)INP for BioSandwich
BBa_K394003BBa_K394003 Version 1 (Component)Sex-Lethal from Drosophila melanogaster
BBa_K177028BBa_K177028 Version 1 (Component)mitochondrial location signal from Cox gene
BBa_K1053121BBa_K1053121 Version 1 (Component)HTLV-1 Rex peptide
BBa_K523013BBa_K523013 Version 1 (Component)Plac + INP-EYFP
BBa_I728004BBa_I728004 Version 1 (Component)CPX with polystyrene-binding peptide
BBa_K242004BBa_K242004 Version 1 (Component)Operator binding site for Cox
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K523020BBa_K523020 Version 1 (Component)Plac + INP-bglX
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K563052BBa_K563052 Version 1 (Component)combination of pSB1A11, CEN/ARS, TRP1
BBa_K530035BBa_K530035 Version 1 (Component)pRSBB416 URA3 CEN/ARS Yeast Shuttle Vector