iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J70307BBa_J70307 Version 1 (Component)J70306 with PsrI ends
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
EcoRIEcoRI Version 1 (Component) NheINheI Version 1 (Component) PacIPacI Version 1 (Component) SpeISpeI Version 1 (Component) BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_J70306BBa_J70306 Version 1 (Component)Similar to S03621, except PsrI sites (some portions of B0010, B0012) removed
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K1763010BBa_K1763010 Version 1 (Component)Major Spidroin Protein 1 (MaSp1) with Sticky Ends AB
BBa_K1763012BBa_K1763012 Version 1 (Component)Major Spidroin Protein 1 (MaSp1) with Sticky Ends CA
BBa_K1763011BBa_K1763011 Version 1 (Component)Major Spidroin Protein 1 (MaSp1) with Sticky Ends BC
BBa_K1763004BBa_K1763004 Version 1 (Component)Major Spidroin Protein 2 (MaSp2) with sticky ends CA
BBa_J70009BBa_J70009 Version 1 (Component)LASR1 (actually LASR3)
BBa_J70300BBa_J70300 Version 1 (Component)Strong Me. florum promoter
BBa_J70427BBa_J70427 Version 1 (Component)R0010.J70400.E0020 or J70406.E0020
BBa_J70426BBa_J70426 Version 1 (Component)R0010.J70400.E0030 or J70406.E0030
BBa_J70301BBa_J70301 Version 1 (Component)Heat shock inducible promoter for Me. florum
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
TnPBBa_J61023 Version 1 (Component)Tn5 Transposase [Tnp1-PN] (with PstI and NotI)
PfrIBBa_K1493200 Version 1 (Component)Ferric regulator PfrI
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K1763009BBa_K1763009 Version 1 (Component)Major Spidroin Protein 2 (MaSp2) Sequencing Core with AB Sticky Ends
BBa_K602000BBa_K602000 Version 1 (Component)<i>Deinococcus radiodurans</i> PprI
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
BBa_I742133BBa_I742133 Version 1 (Component)CrtIB genes with PstI site mutated out
BBa_J70015BBa_J70015 Version 1 (Component)PpiI and PsrI LASR Left Testing Part
BBa_J70012BBa_J70012 Version 1 (Component)A BioScaffold Part (Uses PsrI), Protein Head Remover see Part Design page
BBa_J70367BBa_J70367 Version 1 (Component)PsrI Invariant Green {β,0,5,-5,PsrI;β,5,0,5,PsrI}
BBa_J70036BBa_J70036 Version 1 (Component)A BioScaffold Part (Uses AarI) for Library Insert Preparation (see Part Design page)
BBa_J70006BBa_J70006 Version 1 (Component)Click Beetle Luciferase Green
BBa_J70304BBa_J70304 Version 1 (Component)constitutive cat cassette for Mesoplasma florum
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_J70326BBa_J70326 Version 1 (Component)B1001.f.1: B1001 forward oligo part