Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1606001BBa_K1606001 Version 1 (Component)Kumamolisin in alpha secretion factor
BBa_P10598BBa_P10598 Version 1 (Component)GoldenBraid destination vector omega insert
BBa_K1800001BBa_K1800001 Version 1 (Component)Alpha-Factor Secretion Signal
BBa_K918000BBa_K918000 Version 1 (Component)Mating Factor Alpha Secretion Tag
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_K1871002BBa_K1871002 Version 1 (Component)Alpha amylase with mating factor alpha secretion
pFig2cBBa_K1829002 Version 1 (Component)pFig2c: Mating factor alpha responsive promoter
BBa_K863206BBa_K863206 Version 1 (Component)Mating factor alpha 1 with Kozak sequence
pBar1BBa_K1829001 Version 1 (Component)pBar1: Mating factor alpha responsive promoter
MFa1-SecreBBa_K792002 Version 1 (Component)Secretion tag from yeast α-factor mating pheromone (MFα1)
BBa_I732092BBa_I732092 Version 1 (Component)Double Repoters (LacZ-alpha and RFP)
BBa_K1829005BBa_K1829005 Version 1 (Component)pAga1: mating factor alpha responsive promoter
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1829007BBa_K1829007 Version 1 (Component)Ste2: ligand receptor of mating factor alpha
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K1871001BBa_K1871001 Version 1 (Component)Alpha amylase with native secretion
BBa_K284150BBa_K284150 Version 1 (Component)Alpha Hemolysin Secretion System
BBa_K539714BBa_K539714 Version 1 (Component)kivd (alpha-ketoisovalerate decarboxylase)
BBa_K1531005BBa_K1531005 Version 1 (Component)Bovine kappa casein (B variant) with full alpha-factor yeast secretion signal
BBa_K1531004BBa_K1531004 Version 1 (Component)Bovine beta casein (B variant) with full alpha-factor yeast secretion signal
BBa_K346001BBa_K346001 Version 1 (Component)RBS (B0034) + MerR (mercury-responsive transcription factor)
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K215001BBa_K215001 Version 1 (Component)Secretion Signal and Streptavidin Binding Tags
BBa_M36037BBa_M36037 Version 1 (Component)Alpha Factor Mating Pheromone Producer
mFalphaBBa_K1829006 Version 1 (Component)Mating Factor Alpha (mFalpha)
G319S_TriBBa_K590022 Version 1 (Component)Kumamolisin-As_G319S, D358G, D368H
KumaBBa_K590021 Version 1 (Component)Kumamolisin-As
BBa_J331003BBa_J331003 Version 1 (Component)kumamolisin-As
N291DBBa_K590023 Version 1 (Component)Kumamolisin-As_N291D
BAT2BBa_J45008 Version 1 (Component)branched-chain amino acid transaminase (BAT2); converts leucine to alpha-ketoisocaproate
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
lacZ aBBa_E0033 Version 1 (Component)LacZ alpha fragment; complements matching N-terminal deletion mutant (lacZ-omega)
BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_K1166002BBa_K1166002 Version 1 (Component)HlyA-tag+Secretion system
NAGABBa_K1483000 Version 1 (Component)α-N-Acetylgalactosamindase
BBa_K109551BBa_K109551 Version 1 (Component)TrbA transcription factor for the Tra2 operon in incP alpha conjugation
BBa_K517002BBa_K517002 Version 1 (Component)alpha-pinene synthase
BBa_I732018BBa_I732018 Version 1 (Component)lacZ alpha fragment (RBS+ TERM-)