Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
LacILacI Version 1 (Component) PacIPacI Version 1 (Component) P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
LacIBBa_I732100 Version 1 (Component)LacI
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_P0412BBa_P0412 Version 1 (Component)PoPS -> LacI [S0150]
LacZBBa_I732005 Version 1 (Component)lacZ (encoding beta-galactosidase, full-length)
LacYBBa_K137001 Version 1 (Component)LacY
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K731500BBa_K731500 Version 1 (Component)[LacI + LacIq promoter] reverse + [tac promoter + lac operator] forward
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
LacIBBa_K143033 Version 1 (Component)LacI (Lva<sup>-</sup>, N-terminal deletion) regulatory protein
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
BBa_K1341002BBa_K1341002 Version 1 (Component)LACI in logic gate
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
lacIBBa_C0013 Version 1 (Component)Repressor, lacI
BBa_K1341003BBa_K1341003 Version 1 (Component)TetR in logic gate
BBa_K1363608BBa_K1363608 Version 1 (Component)gate of or of RNA logic gates
BBa_I732820BBa_I732820 Version 1 (Component)LacI (RBS+, TERM+)
BBa_K1363603BBa_K1363603 Version 1 (Component)gate of no of RNA logic gates
BBa_K1363609BBa_K1363609 Version 1 (Component)gate of or of RNA logic gates
BBa_K1363605BBa_K1363605 Version 1 (Component)gate of and of RNA logic gates
BBa_K1813019BBa_K1813019 Version 1 (Component)LacI Repressor Reversed
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_K173005BBa_K173005 Version 1 (Component)tetR logic inverter
BBa_K1363601BBa_K1363601 Version 1 (Component)the gate of yes of RNA logic gates
lacI tsBBa_J06501 Version 1 (Component)LacI repressor (temperature-sensitive mut 265) (+LVA)
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
BBa_K091110BBa_K091110 Version 1 (Component)LacI Promoter
BBa_K1363607BBa_K1363607 Version 1 (Component)key-2 of and-gate of RNA logic gates
BBa_K1363606BBa_K1363606 Version 1 (Component)key-1-of and-gate of RNA logic gates
BBa_K1585999BBa_K1585999 Version 1 (Component)lacI binding site
BBa_K1363611BBa_K1363611 Version 1 (Component)key-1 of gate-of-or of RNA logic gates
BBa_I14044BBa_I14044 Version 1 (Component)weak RBS . LacI
BBa_K1341010BBa_K1341010 Version 1 (Component)OUTPUT SYS(GFP)LOGIC GATE IN Graph Theory 2