Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_P101110BBa_P101110 Version 1 (Component)LIS RBS.ORF.Term
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_P101109BBa_P101109 Version 1 (Component)LMS RBS.ORF.Term
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_P101107BBa_P101107 Version 1 (Component)EHT1 RBS.ORF.Term
BBa_P101105BBa_P101105 Version 1 (Component)SAAT RBS.ORF.Term
BBa_P101113BBa_P101113 Version 1 (Component)PAD1 RBS.ORF.Term
BBa_P101101BBa_P101101 Version 1 (Component)SAMT RBS.ORF.Term
BBa_P101108BBa_P101108 Version 1 (Component)EEB1 RBS.ORF.Term
BBa_P101106BBa_P101106 Version 1 (Component)BEAT RBS.ORF.Term
BBa_P101102BBa_P101102 Version 1 (Component)BAMT RBS.ORF.Term
BBa_P101111BBa_P101111 Version 1 (Component)Oe23 RBS.ORF.Term
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_P101104BBa_P101104 Version 1 (Component)JMT RBS.ORF.Term (Synth)
BBa_P101112BBa_P101112 Version 1 (Component)Myrcene Synthase RBS.ORF.Term
BBa_P101103BBa_P101103 Version 1 (Component)JMT RBS.ORF.Term (PCR)
las TetOBBa_I14015 Version 1 (Component)P(Las) TetO
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
Lin-2BO_9115 Version 1 (Component) xisBBa_K112200 Version 1 (Component){xis!} from bacteriophage lambda; assembly standard 21
LiaSBO_26736 Version 1 (Component) amyE 5 ISBBa_K143001 Version 1 (Component)5??? Integration Sequence for the amyE locus of B. subtilis
licSBO_32189 Version 1 (Component) eGFP+HisBBa_K193202 Version 1 (Component)EGFP(enhanced Green Fluorescent Protein) with His tag
liaSBO_32658 Version 1 (Component) LicSBO_11169 Version 1 (Component) ligBO_32015 Version 1 (Component) lipBO_28535 Version 1 (Component) LipBO_26921 Version 1 (Component) HisBBa_K128005 Version 1 (Component)His affinity tag
FliSBO_11069 Version 1 (Component) fliSBO_31692 Version 1 (Component) BclA-HisBBa_K1933000 Version 1 (Component)N-terminal domain of BclA protein fused to 6xHis tag
HisBBa_M0021 Version 1 (Component)Poly-His affinity tag
His-Sc_Si4BBa_K1602030 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein
xis/intBBa_K112234 Version 1 (Component){rbs.xis.int!} The bacteriophage lambda xis/integrase gene with native rbs and stop codon; assembly
HisBBa_K112703 Version 1 (Component)His affinity tag