Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

OmpR
BBa_R0082 Version 1 (Component)
Promoter (OmpR, positive)

BBa_K1991005
BBa_K1991005 Version 1 (Component)
LO-AOX1-His (Lpp-OmpA-Alcohol Oxidase)

OmpR
BBa_R0084 Version 1 (Component)
Promoter (OmpR, positive)

OmpA
BBa_K103006 Version 1 (Component)
OmpA outer membrane protein A fused to linker; displays proteins on cell surface

BBa_K863201
BBa_K863201 Version 1 (Component)
3' UTR site of alcohol oxidase 1 gene (aox1)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K863200
BBa_K863200 Version 1 (Component)
5' UTR site of alcohol oxidase 1 gene (aox1)

BBa_K1991000
BBa_K1991000 Version 1 (Component)
AOX1 (Alcohol oxidase)

OmpR
BBa_R0083 Version 1 (Component)
Promoter (OmpR, positive)

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

His-Stop
BBa_K133133 Version 1 (Component)
His affinity tag-stop

BBa_K1991001
BBa_K1991001 Version 1 (Component)
AOX2 (Alcohol Oxidase)

BBa_K1991006
BBa_K1991006 Version 1 (Component)
LO-AOX2-His

RGD-His-St
BBa_K133036 Version 1 (Component)
RGD-His affinity tag-Stop

BBa_K1694002
BBa_K1694002 Version 1 (Component)
Lpp-OmpA-N

BBa_K1991002
BBa_K1991002 Version 1 (Component)
Pcons-RBS-AOX1 (Alcohol Oxidase)

BBa_K1991008
BBa_K1991008 Version 1 (Component)
Pcons-RBS-LO-AOX1-His

BBa_J36846
BBa_J36846 Version 1 (Component)
Lpp-OmpA(46-159)-Streptavidin wild-type + His6

ATF1
BBa_J45014 Version 1 (Component)
alcohol acetyltransferase I; converts isoamyl alcohol to isoamyl acetate (banana odor)

BBa_K1991009
BBa_K1991009 Version 1 (Component)
Pcons-RBS-LO-AOX2-His

BBa_K875004
BBa_K875004 Version 1 (Component)
T5LacO-LPP-OmpA-scFv (scFv 54.6 antinorovirus)-6HIS-TT

BBa_K1921017
BBa_K1921017 Version 1 (Component)
LPP-OmpA

BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)

MaoA
BBa_K1615022 Version 1 (Component)
Monoamine Oxidase A RFC25

BBa_K195401
BBa_K195401 Version 1 (Component)
Lpp-OmpA-linker -F10scFv

spxB
BBa_K137069 Version 1 (Component)
Pyruvate oxidase (SpxB)

BBa_K1921018
BBa_K1921018 Version 1 (Component)
LPP-OmpA+linker.a

Hin
BBa_J31000 Version 1 (Component)
DNA-invertase Hin from Salmonella typhimurium

His
BBa_K157011 Version 1 (Component)
His affinity tag; Freiburg standard

BBa_K1991004
BBa_K1991004 Version 1 (Component)
Lpp-OmpA-BamHI

BBa_K1694010
BBa_K1694010 Version 1 (Component)
Lpp-OmpA

BBa_J36850
BBa_J36850 Version 1 (Component)
Lac-inducible generator of Lpp-OmpA(46-159)-Streptavidin wild-type + His6 tag

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_K1855003
BBa_K1855003 Version 1 (Component)
Lpp-OmpA sZF14

BBa_K1855000
BBa_K1855000 Version 1 (Component)
Lpp-OmpA Zif268

BBa_K1855001
BBa_K1855001 Version 1 (Component)
Lpp-OmpA sZF2

BBa_K1855002
BBa_K1855002 Version 1 (Component)
Lpp-OmpA sZF10

BBa_K199106
BBa_K199106 Version 1 (Component)
pLpp promoter

BBa_B0053
BBa_B0053 Version 1 (Component)
Terminator (His)

BBa_K215261
BBa_K215261 Version 1 (Component)
Lpp + 5tmr OmpA + GS Linker + TEV site + WT Streptavidin + 6His

BBa_K1694024
BBa_K1694024 Version 1 (Component)
Pcons+B0034+Lpp-OmpA-N+scFv(Anti-EGFR)

BBa_K1991010
BBa_K1991010 Version 1 (Component)
Pcons-RBS-LO-GFP-His

BBa_K1827000
BBa_K1827000 Version 1 (Component)
E.coli signal-lpp-ompA

BBa_J36848
BBa_J36848 Version 1 (Component)
Lac-inducible generator of Lpp-OmpA(46-66)-Streptavidin wild-type + His6tag