SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
BBa_K611012BBa_K611012 Version 1 (Component)pTet Characterization Construct
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_K511102BBa_K511102 Version 1 (Component)mKate MammoBlock
BBa_K611079BBa_K611079 Version 1 (Component)LVA 5' -22bp, Barcode 3' -16bp Truncation (BBa_K611102) test construct
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K515102BBa_K515102 Version 1 (Component)J23100 promoter - PA2652
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
BBa_K611078BBa_K611078 Version 1 (Component)LVA 5' -11bp, Barcode 3' -16bp Truncation (BBa_K611101) test construct
BBa_K215102BBa_K215102 Version 1 (Component)prtF from erwinia chrysanthemi
BBa_K411105BBa_K411105 Version 1 (Component)eIF4A binding aptamer
BBa_K511100BBa_K511100 Version 1 (Component)EBFP2 MammoBlock
BBa_K511101BBa_K511101 Version 1 (Component)EYFP-FF4x4 MammoBlock
BBa_K511302BBa_K511302 Version 1 (Component)Delta-mCherry Juxtacrine Signaling Ligand MammoBlock
BBa_K611077BBa_K611077 Version 1 (Component)LVA 5' -22bp, Barcode 3' -8bp Truncation (BBa_K611100) test construct
BBa_K611102BBa_K611102 Version 1 (Component)Truncated LVA (5' -22bp) Tag with Double Stop Codon and Truncated Barcode (3' -16bp)
GFP generaBBa_E0840 Version 1 (Component)GFP generator
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
creBBa_K112102 Version 1 (Component)Cre enzyme without start or stop codons
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
GeBBBa_K411102 Version 1 (Component)GFP_split_B + Linker + eIF4A_split_B
YFPBBa_K411202 Version 1 (Component)Yellow Fluorescent Protein (YFP)
GeABBa_K411101 Version 1 (Component)GFP_split_A + Linker + eIF4A_split_A
BBa_K611101BBa_K611101 Version 1 (Component)Truncated LVA (5' -11bp) Tag with Double Stop Codon and Truncated Barcode (3' -16bp)
BBa_K611100BBa_K611100 Version 1 (Component)Truncated LVA (5' -22bp) Tag with Double Stop Codon and Truncated Barcode (3' -8bp)
BBa_K611103BBa_K611103 Version 1 (Component)LVA tag, Double Stop Codon, Barcode
ReBBBa_K411104 Version 1 (Component)RFP_split_B + Linker + eIF4A_split_B
BBa_K511202BBa_K511202 Version 1 (Component)rtTA-DD Transactivator MammoBlock
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
c2 P22BBa_C0053 Version 1 (Component)c2 repressor from Salmonella phage P22 (+LVA)
BBa_K1114102BBa_K1114102 Version 1 (Component)MoClo format of a modified version of BBa_B0032 with BC fusion sites
//testtest Version 1 (Collection) ReABBa_K411103 Version 1 (Component)RFP_split_A + Linker + eIF4A_split_A
eIF4ABBa_K411100 Version 1 (Component)Eukaryote Initiation Factor 4A (eIF4A) from Mus Musculus
BBa_K511002BBa_K511002 Version 1 (Component)minCMV-4xMnt Promoter MammoBlock
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
eyfpBBa_E0031 Version 1 (Component)EYFP (RBS+ LVA-)
BBa_K411002BBa_K411002 Version 1 (Component)Theophylline-inducible Riboswitch+GFP+Terminator
BBa_K511103BBa_K511103 Version 1 (Component)amCyan-miRFF4 MammoBlock