Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
LacILacI Version 1 (Component) P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
pT7BBa_I719005 Version 1 (Component)T7 Promoter
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
PacIPacI Version 1 (Component) eyfpBBa_E0031 Version 1 (Component)EYFP (RBS+ LVA-)
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
ecfpBBa_E0021 Version 1 (Component)ECFP (RBS+ LVA-)
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
BBa_E0422BBa_E0422 Version 1 (Component)ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
BBa_E0420BBa_E0420 Version 1 (Component)ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
OmpRBBa_R0082 Version 1 (Component)Promoter (OmpR, positive)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_I712004BBa_I712004 Version 1 (Component)CMV promoter
c2 P22BBa_C0053 Version 1 (Component)c2 repressor from Salmonella phage P22 (+LVA)
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_E0432BBa_E0432 Version 1 (Component)EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)