Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_M45195BBa_M45195 Version 1 (Component)Legionella survival gene lspI in amoeba
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_M45192BBa_M45192 Version 1 (Component)Legionella survival gene lspK in amoeba
GerEBO_11469 Version 1 (Component) BBa_M45199BBa_M45199 Version 1 (Component)Legionella survival promoter
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
BBa_M45196BBa_M45196 Version 1 (Component)Salmonella invasion gene invR for amoeba
BBa_M45198BBa_M45198 Version 1 (Component)Salmonella invasion gene invE for amoeba
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1109005BBa_K1109005 Version 1 (Component)Anti-legionella unit
BBa_J22101BBa_J22101 Version 1 (Component)Lac Y gene
BBa_K1820023BBa_K1820023 Version 1 (Component)FspI + terminator
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1109004BBa_K1109004 Version 1 (Component)Anti-legionella unit
BBa_K1820022BBa_K1820022 Version 1 (Component)FspI restriction enzyme
BBa_K830000BBa_K830000 Version 1 (Component)anti legionella cassette
lsrRBBa_K091001 Version 1 (Component)LsrR gene
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
lsrKBBa_K091002 Version 1 (Component)LsrK gene
sspIBO_31933 Version 1 (Component) LspABO_9444 Version 1 (Component) BBa_J33201BBa_J33201 Version 1 (Component)E. coli chromosomal ars promoter with arsR repressor gene
BBa_J33204BBa_J33204 Version 1 (Component)xylE reporter gene with rbs
ccdBBBa_P1010 Version 1 (Component)ccdB cell death gene
BBa_I750016BBa_I750016 Version 1 (Component)Gas Vesicle polycistonic gene
NosZ+SYFPBBa_K1866001 Version 1 (Component)NosZ gene+SuperYellowFluorescenceProtein (in pSB1A3)
BBa_M45203BBa_M45203 Version 1 (Component)Biosensor with Legionella Promoter (Device 2)
lspBO_29737 Version 1 (Component) BBa_K2042016BBa_K2042016 Version 1 (Component)Non-coding scar site in between RBS and gene
BBa_K641020BBa_K641020 Version 1 (Component)P(cspI) - Stress Promoter
ATF1 generBBa_J45199 Version 1 (Component)Banana odor enzyme (ATF1) generator
BsaI ->BBa_K1362425 Version 1 (Component)BsaI restriction site for RFC[???] cloning (in part in prefix)
BBa_K309020BBa_K309020 Version 1 (Component)eCFP (for use in C. elegans chassis)
BBa_J64019BBa_J64019 Version 1 (Component)invI SPI-1 Protein
BBa_K1583054BBa_K1583054 Version 1 (Component)Non-coding scar site in between RBS and gene
HerEBBa_K1615045 Version 1 (Component)Heroin Esterase in RFC25
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K315015BBa_K315015 Version 1 (Component)TetA gene (DeOptimized from bp 1 to 141)
BBa_K863204BBa_K863204 Version 1 (Component)shuttle vector pECPP11JS for recombination of genes of interest in yeast