SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_M30109BBa_M30109 Version 1 (Component)Light responsive system, dual regulation
BBa_I741005BBa_I741005 Version 1 (Component)XylR Transcriptional Regulator Right Facing
BBa_K892002BBa_K892002 Version 1 (Component)Red Light responsive system, dual regulation
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_K346002BBa_K346002 Version 1 (Component)PmerT promoter (mercury-responsive)
BBa_K216005BBa_K216005 Version 1 (Component)PyeaR promoter, responsive to nitrate, nitrite and nitric oxide
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
BBa_K1132017BBa_K1132017 Version 1 (Component)For the characterisation of the red light responsive system, under tetR regulation
BBa_J13014BBa_J13014 Version 1 (Component)LacI repressed light responsive system
BBa_J13015BBa_J13015 Version 1 (Component)TetR repressed light responsive system
BBa_K608101BBa_K608101 Version 1 (Component)CcaR, green light response regulator
PlsiRBBa_K1725400 Version 1 (Component)PlsiR (Promoter of light and stress integrating response Regulator)
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
BBa_K360021BBa_K360021 Version 1 (Component)LovTAP: Blue Light Photosensor and Transcriptional Regulator
BBa_K1151000BBa_K1151000 Version 1 (Component)Nickel-responsive pleiotropic regulator (HpNikR)
BBa_K346001BBa_K346001 Version 1 (Component)RBS (B0034) + MerR (mercury-responsive transcription factor)
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
FixJBBa_K592005 Version 1 (Component)FixJ, the response regulator to YF1
BBa_K1315007BBa_K1315007 Version 1 (Component)The BCAM0228 Response Regulator from <i>Burkholderia</i>
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
BBa_K892000BBa_K892000 Version 1 (Component)Red light responsive luciferase
BBa_K801039BBa_K801039 Version 1 (Component)SV40NLS-GAL4AD-linker-PIF3 (part for GAL4/LexA based light-switchable promoter system)
BBa_J26011BBa_J26011 Version 1 (Component)Light Sensing System
BBa_M11082BBa_M11082 Version 1 (Component)ZntR:Zn(II)-responsive regulator of zntA (also MerR transcriptional regulator)
UirRBBa_K1725420 Version 1 (Component)UirR (UV intensity response Regulator)
BBa_K1797001BBa_K1797001 Version 1 (Component)Red Light Sensing System
BBa_I750009BBa_I750009 Version 1 (Component)Red light => Response
BBa_K415506BBa_K415506 Version 1 (Component)pTRE-Tight L4R1 MammoBlock
RcsBBBa_K200000 Version 1 (Component)Colanic acid global regulator -> RcsB
BBa_M36919BBa_M36919 Version 1 (Component)ZntR:Zn(II)-responsive regulator of zntA (also MerR transcriptional regulator)
BBa_K1355001BBa_K1355001 Version 1 (Component)Regulation and transport of mercury ions
BBa_K776020BBa_K776020 Version 1 (Component)Complete system (concentration dependent promoter Light)
BBa_I750008BBa_I750008 Version 1 (Component)Red light => Response
BBa_K135000BBa_K135000 Version 1 (Component)pCpxR (CpxR responsive promoter)
Lov-tetRBBa_K785000 Version 1 (Component)Lov-tetR (light sensor with Ptet repression) light->PtetO repressed
BBa_I712011BBa_I712011 Version 1 (Component)CUb (split ubiquitin system)
BBa_K1590004BBa_K1590004 Version 1 (Component)Regulator or Chromate responsive promoter
BBa_K1443000BBa_K1443000 Version 1 (Component)Blue Light Response Element