SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
BBa_J329011BBa_J329011 Version 1 (Component)LuxIR QS System II
const.BBa_R1075 Version 1 (Component)Constitutive Promoter II
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_J329020BBa_J329020 Version 1 (Component)LuxIR QS System with Double luxI
luxRBBa_R0061 Version 1 (Component)Promoter (HSL-mediated luxR repressor)
BBa_J329021BBa_J329021 Version 1 (Component)LuxIR QS System with Double luxI with weaker RBS
TD0.01BBa_K750012 Version 1 (Component)TIME DELAY0.01:LuxI(RBS0.01)->LuxR->LuxPR->GFP
TD1.0BBa_K750009 Version 1 (Component)TIME DELAY1.0:LuxI(RBS1.0)->LuxR->LuxPR->GFP
TD0.6BBa_K750010 Version 1 (Component)TIME DELAY 0.6:LuxI(RBS0.6)->LuxR->LuxPR->GFP
BBa_K546000BBa_K546000 Version 1 (Component)Lux pL controlled LuxR with lux pR autoinducing LuxI(lva tag)- AHL.
BBa_K750007BBa_K750007 Version 1 (Component)LuxR->LuxPR->GFP
cI857BBa_J06503 Version 1 (Component)Lambda cI857 (Lambda II) (RBS- LVA+)
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
BBa_J329002BBa_J329002 Version 1 (Component)Intermediate part for making a QS system
BBa_J329040BBa_J329040 Version 1 (Component)luxIR QS System with B0034 RBSs and LVA-tagged GFP
BBa_K116634BBa_K116634 Version 1 (Component)RBS + LuxR + RBS + LuxI + T
BBa_K266007BBa_K266007 Version 1 (Component)Complex QS -> LuxI & LasI circuit
BBa_M36042BBa_M36042 Version 1 (Component)EfeU elemental iron (II) transporter
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_I712011BBa_I712011 Version 1 (Component)CUb (split ubiquitin system)
BBa_J329031BBa_J329031 Version 1 (Component)QS System with Strong RBS + Const. RFP Expression
BBa_M36726BBa_M36726 Version 1 (Component)Type II Signal Peptide
TD0.3BBa_K750011 Version 1 (Component)TIME DELAY0.3:LuxI(RBS0.3)->LuxR->LuxPR->GFP
LuxRBBa_K176025 Version 1 (Component)pCon 0.70(J23101)->RBS+luxR+T
QS->RFPBBa_J85120 Version 1 (Component)High Population->mRFP (pLac->LuxI; pLacIQ->luxR; pLux->mRFP;)
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_K176085BBa_K176085 Version 1 (Component)cell density->PoPS: pCon 0.15->luxI-LVA+pCon 0.70->luxR+pLux/Tet->PoPS
BBa_K116640BBa_K116640 Version 1 (Component)pTet + RBS + LuxR + T
BBa_J329030BBa_J329030 Version 1 (Component)QS System with BBa_J329998 Synthetic RBS + Const. RFP Expression
BBa_J329010BBa_J329010 Version 1 (Component)luxIR Quroum Sensing System I
BBa_J329006BBa_J329006 Version 1 (Component)Simple QS Circuit with GFP Controlled by LuxR Promoter
BBa_K223049BBa_K223049 Version 1 (Component)SoxR - SoxS System with Blh and RALDH II system
BBa_K510036BBa_K510036 Version 1 (Component)Improved Flip Flop (Module II: asRNA)