SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K546000BBa_K546000 Version 1 (Component)Lux pL controlled LuxR with lux pR autoinducing LuxI(lva tag)- AHL.
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_K1666000BBa_K1666000 Version 1 (Component)LsrA of LuxS/AI-2 signaling pathway in Salmonalla
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_K1666004BBa_K1666004 Version 1 (Component)LsrK of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666001BBa_K1666001 Version 1 (Component)LsrB of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666003BBa_K1666003 Version 1 (Component)LsrD of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666002BBa_K1666002 Version 1 (Component)LsrC of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666005BBa_K1666005 Version 1 (Component)LsrR of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1202110BBa_K1202110 Version 1 (Component)AI-2 Generator (LuxS-Pfs)
BBa_K228011BBa_K228011 Version 1 (Component)LuxR-LuxP-SupD
luxRBBa_R0061 Version 1 (Component)Promoter (HSL-mediated luxR repressor)
BBa_K1981101BBa_K1981101 Version 1 (Component)lsr promoter of LuxS/AI-2 signaling pathway in E.coli
BBa_K1666006BBa_K1666006 Version 1 (Component)lsr promoter of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K546003BBa_K546003 Version 1 (Component)Lux pL controlled LuxR + lux pR promoter.
BBa_K266000BBa_K266000 Version 1 (Component)PAI+LasR -> LuxI (AI)
BBa_K284027BBa_K284027 Version 1 (Component)QseA promoter - activated by AI-2
BBa_K266005BBa_K266005 Version 1 (Component)PAI+LasR -> LasI & AI+LuxR --| LasI
BBa_K204047BBa_K204047 Version 1 (Component)AI-1 generator
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
BBa_K116634BBa_K116634 Version 1 (Component)RBS + LuxR + RBS + LuxI + T
BBa_K266006BBa_K266006 Version 1 (Component)PAI+LasR -> LasI+GFP & AI+LuxR --| LasI+GFP
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
BBa_K1725213BBa_K1725213 Version 1 (Component)LuxC + LuxD both with B0032
LuxR/PBBa_I13201 Version 1 (Component)Natural Lux Promoter Preceded by LuxR
IR-GFPBBa_K658016 Version 1 (Component)LuxI->LuxR->lux pR->GFP
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
TD0.01BBa_K750012 Version 1 (Component)TIME DELAY0.01:LuxI(RBS0.01)->LuxR->LuxPR->GFP
TD1.0BBa_K750009 Version 1 (Component)TIME DELAY1.0:LuxI(RBS1.0)->LuxR->LuxPR->GFP
BBa_K199130BBa_K199130 Version 1 (Component)LuxI with 2 sites