Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
aiiABBa_C0160 Version 1 (Component)autoinducer inactivation enzyme aiiA (no LVA)
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
BBa_K608006BBa_K608006 Version 1 (Component)medium Promoter , medium RBS
BBa_I766555BBa_I766555 Version 1 (Component)pCyc (Medium) Promoter
BBa_J329054BBa_J329054 Version 1 (Component)Medium AiiA Expression Part
BBa_J329055BBa_J329055 Version 1 (Component)Medium AiiA Expression Part
BBa_J329056BBa_J329056 Version 1 (Component)Medium AiiA Expression Part
BBa_J329053BBa_J329053 Version 1 (Component)Medium AiiA Expression Part
BBa_J329052BBa_J329052 Version 1 (Component)Medium AiiA Expression Part
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_K516022BBa_K516022 Version 1 (Component)AiiA protein generator TERM+ RBS+(B0032)
BBa_I0460BBa_I0460 Version 1 (Component)aiiA Device (B0034.C0060.B0015)
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_K608007BBa_K608007 Version 1 (Component)medium Promoter , weak RBS
BBa_K608003BBa_K608003 Version 1 (Component)strong Promoter , medium RBS
tetRBBa_Q01400 Version 1 (Component)QPI (TetR, Medium RBS)
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_J329050BBa_J329050 Version 1 (Component)Strong AiiA Expression Plasmid
Bt-ALDHBBa_K398006 Version 1 (Component)Medium-Chain Aldehyde Dehydrogenase
BBa_K1060009BBa_K1060009 Version 1 (Component)Medium constitutive expression of EBF synthase from Artemisia annua
BBa_J329051BBa_J329051 Version 1 (Component)Low AiiA Expression Plasmid
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_J119024BBa_J119024 Version 1 (Component)BD18 bicistronic translational junction - Medium effiency
BBa_J64100BBa_J64100 Version 1 (Component)Medium copy ColE1 BioBrick vector
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
Sin3BBa_K165003 Version 1 (Component)Sin3 Repression Domain
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K608017BBa_K608017 Version 1 (Component)medium promoter and medium RBS with RFP
BBa_K608011BBa_K608011 Version 1 (Component)Medium promoter with medium RBS and GFP
BBa_J329060BBa_J329060 Version 1 (Component)Strong AiiA Expression with RFP
BBa_C0260BBa_C0260 Version 1 (Component)autoinducer inactivation enzyme, AaiiA (+RBS)
BBa_K1365169BBa_K1365169 Version 1 (Component)signal sequence from USP45 fused to aiiA
BBa_K819010BBa_K819010 Version 1 (Component)Medium cheZ generator