SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ShortLinkeBBa_K243004 Version 1 (Component)Short Linker (Gly-Gly-Ser-Gly)
MiddleLinkBBa_K243005 Version 1 (Component)Middle Linker ( Gly-Gly-Ser-Gly)x2
LongLinkerBBa_K243006 Version 1 (Component)Long Linker (Gly-Gly-Ser-Gly)x3
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
RFC105 CNBBa_K1362418 Version 1 (Component)N-terminal GG-linker overhang <u>GGTG</u>=Gly+1/3Gly RFC[105] overhang CN
RFC105 NCBBa_K1362417 Version 1 (Component)C-terminal GG-linker overhang GG<u>TGGT</u>=Gly+Gly RFC[105] overhang NC
BBa_K1797016BBa_K1797016 Version 1 (Component)dCas9-Long Linker (Gly-Gly-Ser-Gly)x3-Flp
BBa_I766336BBa_I766336 Version 1 (Component)Ser-Gly-Ser-Gly-Ser ING2 PH Domain
BBa_I766234BBa_I766234 Version 1 (Component)Ser-Gly-Ser-Gly-Ser-Ent5p-ENTH PH Domain
BBa_I766231BBa_I766231 Version 1 (Component)Ser-Gly-Ser-Gly-Ser FYVE-EEA1 PH Domain
BBa_K1797015BBa_K1797015 Version 1 (Component)dCas9-Long Linker (Gly-Gly-Ser-Gly)x3-Bxb1 gp35
BBa_I766232BBa_I766232 Version 1 (Component)Ser-Gly-Ser-Gly-Ser-PLCdelta PH Domain
BBa_K165007BBa_K165007 Version 1 (Component)Gli-1 DNA-binding domain
BBa_K197029BBa_K197029 Version 1 (Component)gly-ser-repeats
BBa_K641005BBa_K641005 Version 1 (Component)ToxR with nhe1 and gly-ser linkers
Gly+1/3LeuBBa_K1362478 Version 1 (Component)Gly+1/3Leu
BBa_K656006BBa_K656006 Version 1 (Component)IPTG Reporter Using Cohesin-Gly-Ser-Gly-Cohesin
BBa_K259008BBa_K259008 Version 1 (Component)BioScaffold Linker - Removes Stop Codons & scars & replaces with a Gly-Ser linker
BBa_K259009BBa_K259009 Version 1 (Component)BioScaffold Linker - Removes Stop Codons & scars & replaces with a Gly-Ser linker
BioScaffolBBa_K259004 Version 1 (Component)BioScaffold Linker - Removes Stop Codons & scars & replaces with a Gly-Ser linker
BioScaffolBBa_K259002 Version 1 (Component)BioScaffold Linker - Removes Stop Codons & scars & replaces with a Gly-Ser linker
2/3GlyBBa_K1362467 Version 1 (Component)other 2/3Gly
Gly3BBa_K1362438 Version 1 (Component)GGG linker
2/3GlyBBa_K1362464 Version 1 (Component)2/3Gly
BBa_K1508003BBa_K1508003 Version 1 (Component)IIA(Glc) + double terminator
glyABO_32661 Version 1 (Component) linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
GLFBBa_K558005 Version 1 (Component)Zymomonas mobilis glucose facilitator gene
BBa_K223025BBa_K223025 Version 1 (Component)HlyR + HlyC + Hly B + Hly D
GlySBO_26771 Version 1 (Component) GlyQBO_26521 Version 1 (Component) glySBO_32519 Version 1 (Component) glyQBO_32701 Version 1 (Component) GlFBBa_K901008 Version 1 (Component)Glucose Facilitator (Glf) from <i>Zymonas mobilis</i>
BBa_K1508002BBa_K1508002 Version 1 (Component)IIA(Glc) - E.coli glucose-specific phosphotransferase enzyme IIA
RFC105 NN*BBa_K1362416 Version 1 (Component)N-terminal non-splicing overhang GGCT=Gly+1/3Leu|Ile RFC[105] overhang NN*
cfpx2BBa_K165014 Version 1 (Component)CFP x2
LytC-Gly-EBBa_K316045 Version 1 (Component)LytC - Glycine Linker - Elastase Cleavage Site - AIP - His Tag
LytC-Gly-TBBa_K316042 Version 1 (Component)LytC - Glycine Linker - TEV Cleavage Site - AIP - His Tag
RFC[105] EBBa_K1362420 Version 1 (Component)C-terminal non-splicing overhang AGGC=1/3Ala+Gly RFC[105] E
BBa_K1159318BBa_K1159318 Version 1 (Component)TEV cleavage site flanked by Gly for better accessibility in RFC[25]
glyABO_2789 Version 1 (Component)