iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
NOR2BBa_I732352 Version 1 (Component)NOR Candidate (U035O44D001O22)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
NOR1BBa_I732351 Version 1 (Component)NOR Candidate (U037O11D002O22)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
NAND2616BBa_I732301 Version 1 (Component)NAND Candidate (U073O26D001O16)
NAND2717BBa_I732302 Version 1 (Component)NAND Candidate (U073O27D001O17)
NAND2-7BBa_I732304 Version 1 (Component)NAND Candidate (U073O22D001O47)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
NAND01BBa_I732303 Version 1 (Component)NAND Candidate (U073O22D001O46)
NAND59BBa_I732305 Version 1 (Component)NAND Candidate (U073O22D059O46)
NANDbetaBBa_I732306 Version 1 (Component)NAND Candidate (U073O11D002O22)
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K850000BBa_K850000 Version 1 (Component)AGM1 gene from candida albicans
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K850002BBa_K850002 Version 1 (Component)UAP1 gene from candida albicans
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
BBa_K1484318BBa_K1484318 Version 1 (Component)Marchantia Polymorpha Candidate Promoter 1
BBa_K648029BBa_K648029 Version 1 (Component)OR, operating region for Lambda switch
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K1614013BBa_K1614013 Version 1 (Component)software generated kanamycin aptamer (candidate 2)
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_K1614017BBa_K1614017 Version 1 (Component)software generated kanamycin aptamer (candidate 3)
BBa_K1614009BBa_K1614009 Version 1 (Component)software generated kanamycin aptamer (candidate 1)
BBa_K1618033BBa_K1618033 Version 1 (Component)Acyltransferase Candidate 1 Expression Construct
BBa_K1618034BBa_K1618034 Version 1 (Component)Acyltransferase Candidate 2 Expression Construct
BBa_K1618035BBa_K1618035 Version 1 (Component)Acyltransferase Candidate 3 Expression Construct
BBa_K1618036BBa_K1618036 Version 1 (Component)Acyltransferase Candidate 4 Expression Construct
PORBBa_K1080007 Version 1 (Component)POR
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
NeoRBBa_K1313004 Version 1 (Component)Neomycin Resistance