iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K1497021BBa_K1497021 Version 1 (Component)Naringenin sensor (FdeR) with mKate as reporter
BBa_K1497022BBa_K1497022 Version 1 (Component)Naringenin sensor (FdeR) with CFP as reporter
BBa_K1497020BBa_K1497020 Version 1 (Component)Naringenin sensor (FdeR) with GFP as reporter
BBa_K1497019BBa_K1497019 Version 1 (Component)fdeR (Naringenin binding protein) and fde operon regulatory domain
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
Pr + GFPBBa_S03335 Version 1 (Component)Pr with GFP as a reporter
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_J33204BBa_J33204 Version 1 (Component)xylE reporter gene with rbs
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K909005BBa_K909005 Version 1 (Component)cI protein with EYFP as a reporter
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K779312BBa_K779312 Version 1 (Component)mKate-HH - Hammerhead attached behind mKate MammoBlock
BBa_M0100BBa_M0100 Version 1 (Component)tRNA_Arg5 to use as transcriptional reporter
BBa_I13602BBa_I13602 Version 1 (Component)Tet operator with CFP reporter (with LVA tag) [R/Tc+]
BBa_J95001BBa_J95001 Version 1 (Component)Renilla Reniformis luciferase reporter
BBa_K511102BBa_K511102 Version 1 (Component)mKate MammoBlock
pLambda+RFBBa_I763007 Version 1 (Component)promoter lambda (cI regulated) with RFP reporter
BBa_K779311BBa_K779311 Version 1 (Component)HH-mKate - Hammerhead attached to front of mKate MammoBlock
BBa_I13600BBa_I13600 Version 1 (Component)Tet with CFP reporter (without LVA tag)
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K1001750BBa_K1001750 Version 1 (Component)AraC sensor with CFP reporter
BBa_I13601BBa_I13601 Version 1 (Component)Lac operator with CFP reporter (without LVA tag) [R/Lc-]
BBa_I746100BBa_I746100 Version 1 (Component)AIP sensor infrastructure (agrC + agrA from S. aureus with RBSes)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K098991BBa_K098991 Version 1 (Component)cI promoter with GFP reporter
BBa_K1055000BBa_K1055000 Version 1 (Component)mKate is a fluorophor derived from dsRed
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K1316005BBa_K1316005 Version 1 (Component)ybiJ promoter coupled to mKate2 reporter gene
BBa_K1316003BBa_K1316003 Version 1 (Component)yqjF promoter coupled to mKate2 reporter gene