Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1799016BBa_K1799016 Version 1 (Component)NsrR open reading frame
BBa_K895006BBa_K895006 Version 1 (Component)GFP open reading frame
BBa_J23012BBa_J23012 Version 1 (Component)Spectinomycin R open-reading-frame basic part
[trbCf]BBa_J23014 Version 1 (Component)trbCf open reading frame basic part
BBa_J61044BBa_J61044 Version 1 (Component)[LLO] Listeriolysin open reading frame
BBa_K612008BBa_K612008 Version 1 (Component)TesA' Open Reading Frame
[TraGr]BBa_J23013 Version 1 (Component)TraGr open reading frame basic part
lsrRBBa_K091001 Version 1 (Component)LsrR gene
BBa_K1799017BBa_K1799017 Version 1 (Component)NsrR open reading frame
NsrRBO_11309 Version 1 (Component) NorRBBa_K256004 Version 1 (Component)NorR
BBa_K248001BBa_K248001 Version 1 (Component)nsrR (nitrite-sensitive transcription repressor)
BBa_K649107BBa_K649107 Version 1 (Component)PlacIQ-lsrR-lsrK
BBa_K649103BBa_K649103 Version 1 (Component)LsrR promoter
BBa_K091115BBa_K091115 Version 1 (Component)LsrR Promoter
Rec-OpenBBa_I726081 Version 1 (Component)Rec-LRY.RC
Open loopBBa_K255004 Version 1 (Component)pTet.lacI-cfp(fusion).terminator.pTet.yfp.terminator
BBa_K1613020BBa_K1613020 Version 1 (Component)QsrR Binding Site binds with Quinone-sensing and response Repressor(QsrR)
BBa_K649102BBa_K649102 Version 1 (Component)RBS-lsrR-lsrK
BBa_K1202108BBa_K1202108 Version 1 (Component)pLsr promoter and LsrR Generator
BBa_K256007BBa_K256007 Version 1 (Component)J23119:NorR
BBa_K1666005BBa_K1666005 Version 1 (Component)LsrR of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1092104BBa_K1092104 Version 1 (Component)T7-QsrR binding site-RBS
BBa_K313013BBa_K313013 Version 1 (Component)loading sequence of RNA phage MS2 (reverse)
BBa_K1362058BBa_K1362058 Version 1 (Component)PelB leading sequence as RFC[105] N-terminal insert
BBa_K2116004BBa_K2116004 Version 1 (Component)AND gate regulated by norR and esaR (one esabox)
BBa_K091139BBa_K091139 Version 1 (Component)RBS+lsrR+TT
BBa_K649105BBa_K649105 Version 1 (Component)PlsrA-gfp-PlsrR-lsrR
BBa_K2056000BBa_K2056000 Version 1 (Component)Constitutive promoter(J23110), RBS(B0034), NsrR(K2056001), Double terminator(B0015)
BBa_K649106BBa_K649106 Version 1 (Component)PlsrA-gfp-PlacIQ-lsrR-lsrK
BBa_K1371004BBa_K1371004 Version 1 (Component)AT-ACP-L1(loading module)
BBa_K1092014BBa_K1092014 Version 1 (Component)T7-QsrR Binding Site-RBS-Dioxygenase
BBa_K2116005BBa_K2116005 Version 1 (Component)AND gate regulated by norR and esaR (two esaboxes)
BBa_K2116007BBa_K2116007 Version 1 (Component)AND gate regulated by norR and esaR (two esaboxes)