Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_I5510BBa_I5510 Version 1 (Component)Olmecs: Synchro-Dualator part 2
BBa_I5310BBa_I5310 Version 1 (Component)Olmecs: Reporter 2 of Synchro-Dualator
BBa_I5410BBa_I5410 Version 1 (Component)Olmecs: Oscillator 2 of Synchro-Dualator
BBa_I5601BBa_I5601 Version 1 (Component)Olmecs *: Dualator part 2
BBa_I5500BBa_I5500 Version 1 (Component)Olmecs: Synchro-Dualator part 1
BBa_I5600BBa_I5600 Version 1 (Component)Olmecs *: Dualator part 1
BBa_I5300BBa_I5300 Version 1 (Component)Olmecs: Reporter 1 of Synchro-Dualator
BBa_I5400BBa_I5400 Version 1 (Component)Olmecs: Oscillator 1 of Synchro-Dualator
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_I5602BBa_I5602 Version 1 (Component)Olmecs *: Dualator
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_I13974BBa_I13974 Version 1 (Component)intermediate for lac synchro device
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_I5210BBa_I5210 Version 1 (Component)Olmecs: Repressilator version 2 (Lambda cI)
BBa_I13978BBa_I13978 Version 1 (Component)Sub-part of the synchro oscillator assemblies
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_I5010BBa_I5010 Version 1 (Component)Olmecs: Inducible expression of Lambda cI repressor
BBa_J34701BBa_J34701 Version 1 (Component)AND part 2
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
BBa_K200006BBa_K200006 Version 1 (Component)OtsB: Part 2 of 2 coding for trehalose producing enzymes
BBa_K774003BBa_K774003 Version 1 (Component)Comparator Circuit Part 2
BBa_K145259BBa_K145259 Version 1 (Component)MEMORY Part 2
BBa_K338004BBa_K338004 Version 1 (Component)PHA Synthase Composite, Part 2/2
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_K077666BBa_K077666 Version 1 (Component)part 2 for interval switch
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
BBa_K1106007BBa_K1106007 Version 1 (Component)pulse generator part 2
BBa_J28025BBa_J28025 Version 1 (Component)Intermediate System Part 2 of 2
BBa_J16002BBa_J16002 Version 1 (Component)iGEM tutorial part (2)