SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K1223002BBa_K1223002 Version 1 (Component)P.A.S.E. 2 cassette
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
BBa_K1223001BBa_K1223001 Version 1 (Component)P.A.S.E. 1 cassette
BBa_K1223008BBa_K1223008 Version 1 (Component)pUC-57-P.A.S.E.2
CmRBBa_J61000 Version 1 (Component)chloramphenicol resistance cassette
cmRBBa_P1004 Version 1 (Component)chloramphenicol resistance cassette
tetABBa_P1005 Version 1 (Component)tetracycline resistance cassette
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
gmRBBa_P1014 Version 1 (Component)gentamicin resistance cassette aph(2)
BBa_K358006BBa_K358006 Version 1 (Component)lambda lysis cassette with terminator
BBa_K1223010BBa_K1223010 Version 1 (Component)pUC-57-P.A.S.E.1
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
hygRBBa_K678021 Version 1 (Component)Hygromycin cassette
BBa_K2066548BBa_K2066548 Version 1 (Component)Synthetic Enhancer Project: 57S (2 Tet binding cassette)
BBa_K2109104BBa_K2109104 Version 1 (Component)Fluorescent Bacterial-2-Hybrid Reporter Cassette
PgadBBa_K559011 Version 1 (Component)Pgad - Intracellular Chloride-Sensing Cassette
BBa_J176072BBa_J176072 Version 1 (Component)EED expression casette 2
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
BBa_J23068BBa_J23068 Version 1 (Component)Intermediate #2 in construction of TraGr cassette
BBa_K1403013BBa_K1403013 Version 1 (Component)Geosmin expression cassette
BBa_K817018BBa_K817018 Version 1 (Component)gamma-delta resolvase cassette
ampRBBa_P1002 Version 1 (Component)ampicillin resistance cassette
BBa_K678022BBa_K678022 Version 1 (Component)Neomycin cassette
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)
Lin-2BO_9115 Version 1 (Component) ccdBBBa_P1016 Version 1 (Component)ccdB cassette without ccdA-
BBa_K314101BBa_K314101 Version 1 (Component)Low constitutive expression cassette
"Eye 2"BBa_K1080011 Version 1 (Component)ChlI2
2/3GlyBBa_K1362467 Version 1 (Component)other 2/3Gly