Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
cII p22BBa_R0053 Version 1 (Component)Promoter (p22 cII regulated)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
c2 P22BBa_C0053 Version 1 (Component)c2 repressor from Salmonella phage P22 (+LVA)
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_I11051BBa_I11051 Version 1 (Component)P21 Xis +AAV
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
PA1_04sPA1_04s Version 1 (Component) RFC 37BBa_K245119 Version 1 (Component)P2
BBa_K1399005BBa_K1399005 Version 1 (Component)GFP (mut3b) with AAV-ssrA degradation tag
BBa_K773004BBa_K773004 Version 1 (Component)mCherry-AAV
BBa_I11041BBa_I11041 Version 1 (Component)HK022 Xis +AAV
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_I746350BBa_I746350 Version 1 (Component)ogr activator from P2 phage
xisBBa_K112200 Version 1 (Component){xis!} from bacteriophage lambda; assembly standard 21
AAVBBa_M0044 Version 1 (Component)AAV degradation tag
P22 attPBBa_I11033 Version 1 (Component)P22 ''attP''
BBa_P0153BBa_P0153 Version 1 (Component)PoPS -> cII (p22) [S0167]
BBa_I746361BBa_I746361 Version 1 (Component)PO promoter from P2 phage
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K1461008BBa_K1461008 Version 1 (Component)GFP (AAV tag +)
P22 attBBBa_I11032 Version 1 (Component)P22 ''attB'', reverse complement
BBa_I732094BBa_I732094 Version 1 (Component)Promoter Activity Reporter (LacZ-alpha and GFP-AAV)
mnt (s)BBa_C0072 Version 1 (Component)mnt repressor (strong) from Salmonella phage P22 (+LVA)
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
BBa_K145150BBa_K145150 Version 1 (Component)Hybrid promoter: HSL-LuxR activated, P22 C2 repressed
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_I13973BBa_I13973 Version 1 (Component)c1 promoter + YFP-aav reporter device
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
RFC 37BBa_K245118 Version 1 (Component)P1
S + P25 +BBa_K320014 Version 1 (Component)S + P25 + P28 + Ori + Tet
xis/intBBa_K112234 Version 1 (Component){rbs.xis.int!} The bacteriophage lambda xis/integrase gene with native rbs and stop codon; assembly
AABBa_K1362465 Version 1 (Component)Double A (2x the nucleotide Adenine)
BBa_I746360BBa_I746360 Version 1 (Component)PF promoter from P2 phage
BBa_I11053BBa_I11053 Version 1 (Component)P21 attP
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
BBa_J09144BBa_J09144 Version 1 (Component)GFP-AAV device, medium RBS
xisBBa_K112204 Version 1 (Component){a~xis!} The bacteriophage lambda xis gene ready to have rbs attached and stop codon; assembly stand
xisBBa_K112001 Version 1 (Component)Xis from bacteriophage lambda, assembly standard 21