ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

c2 P22
BBa_C0053 Version 1 (Component)
c2 repressor from Salmonella phage P22 (+LVA)

P22 attP
BBa_I11033 Version 1 (Component)
P22 ''attP''

P22 attB
BBa_I11032 Version 1 (Component)
P22 ''attB'', reverse complement

BBa_I11053
BBa_I11053 Version 1 (Component)
P21 attP

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

BBa_K1433001
BBa_K1433001 Version 1 (Component)
attB-J23110-attP

BBa_K2100049
BBa_K2100049 Version 1 (Component)
pENTR attB-flipped eYFP-attP (TP901)

BBa_I11052
BBa_I11052 Version 1 (Component)
P21 attB rev comp

RFC 37
BBa_K245119 Version 1 (Component)
P2

BBa_K617004
BBa_K617004 Version 1 (Component)
Lambda attP P'OP

BBa_K1433002
BBa_K1433002 Version 1 (Component)
attL-J23110-attR

attP
BBa_K1463040 Version 1 (Component)
PhiC31 attP site

BBa_I746350
BBa_I746350 Version 1 (Component)
ogr activator from P2 phage

BBa_K2100071
BBa_K2100071 Version 1 (Component)
pEXPR hEF1a: attB-flipped eYFP-attP

BBa_P0153
BBa_P0153 Version 1 (Component)
PoPS -> cII (p22) [S0167]

BBa_I746361
BBa_I746361 Version 1 (Component)
PO promoter from P2 phage

BBa_K1433009
BBa_K1433009 Version 1 (Component)
attL-RTerminator-RTerminator-attR-B

BBa_K2116022
BBa_K2116022 Version 1 (Component)
Anderson Promoter J23118 flanked by tp901 attP and attB sites

BBa_K2116021
BBa_K2116021 Version 1 (Component)
Anderson promoter J23118 flanked by bxb1 attP and attB sites

BBa_K1660010
BBa_K1660010 Version 1 (Component)
RFP+RBS+attB+P+attP+RBS+GFP+Terminator

FlipFlop
BBa_K907002 Version 1 (Component)
Binary signal generator, RBS(reverse) - attB - Promoter - attP - RBS

BBa_K1433010
BBa_K1433010 Version 1 (Component)
J23110-attL-RTerminator-RTerminator-attR-B

BBa_K318014
BBa_K318014 Version 1 (Component)
pCons + attB + RBS + GFP + T + rRFP + rRBS + attP

BBa_K2116023
BBa_K2116023 Version 1 (Component)
Anderson promoter J23118 flanked by phiC31 attP and attB sites

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

mnt (s)
BBa_C0072 Version 1 (Component)
mnt repressor (strong) from Salmonella phage P22 (+LVA)

BBa_K145150
BBa_K145150 Version 1 (Component)
Hybrid promoter: HSL-LuxR activated, P22 C2 repressed

BBa_I11043
BBa_I11043 Version 1 (Component)
HK022 attP

Lambda att
BBa_I11023 Version 1 (Component)
Lambda attP

RFC 37
BBa_K245118 Version 1 (Component)
P1

S + P25 +
BBa_K320014 Version 1 (Component)
S + P25 + P28 + Ori + Tet

attB
BBa_K1463041 Version 1 (Component)
Reversed PhiC31 attB site

FlipFlop
BBa_K907003 Version 1 (Component)
Binary signal generator, promoter reversed, RBS(reverse) - attB - Promoter(reverse) - attP - RBS

BBa_I746360
BBa_I746360 Version 1 (Component)
PF promoter from P2 phage

REINT-6N
BBa_K1433017 Version 1 (Component)
P-C-attL-rT-rT-attR-B-6N-gp35-T

REINT-B003
BBa_K1433016 Version 1 (Component)
P-C-attL-rT-rT-attR-B-B0031-gp35-T

BBa_M36430
BBa_M36430 Version 1 (Component)
Bxb1 attP - reverse

BBa_P0353
BBa_P0353 Version 1 (Component)
PoPS -> cII (p22) [S0161]

BBa_K132030
BBa_K132030 Version 1 (Component)
rfp+attp

BBa_I11051
BBa_I11051 Version 1 (Component)
P21 Xis +AAV

BBa_I11050
BBa_I11050 Version 1 (Component)
P21 Int +LVA