ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
cII p22BBa_R0053 Version 1 (Component)Promoter (p22 cII regulated)
c2 P22BBa_C0053 Version 1 (Component)c2 repressor from Salmonella phage P22 (+LVA)
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
P22 attPBBa_I11033 Version 1 (Component)P22 ''attP''
P22 attBBBa_I11032 Version 1 (Component)P22 ''attB'', reverse complement
BBa_K733010BBa_K733010 Version 1 (Component)<i>Ptms</i>+RBS+<i>ydcD</i>.
BBa_K531006BBa_K531006 Version 1 (Component)Optimized esp gene for <i>C. crescentus</i>
BBa_K733013BBa_K733013 Version 1 (Component)<i>Pveg</i>+R.B.S.
BBa_K733006BBa_K733006 Version 1 (Component)<i>ydjM</i>+<i>Bmp2</i>
BBa_K733001BBa_K733001 Version 1 (Component)<i>Ptms</i> - a constitutive promoter in <i>E. coli</i> and <i>B. subtilis</i>.
BBa_K733012BBa_K733012 Version 1 (Component)<i>xylR</i>+<i>PxylA</i>+RBS+<i>ydcE</i>+<i>Ptms</i>+RBS+<i>ydcD</i>: Cell Growth Inhibition Device
BBa_K733014BBa_K733014 Version 1 (Component)<i>Pveg</i>+RBS+<i>ydjM</i>+<i>Bmp2</i>
phlFBBa_K1725040 Version 1 (Component)<i>phlF</i> encoding PhlF repressor from Pseudomonas protegens Pf-5
BBa_K2151002BBa_K2151002 Version 1 (Component)p32, strong constitutive <i>S. thermophilus</i> promoter
BBa_K2151001BBa_K2151001 Version 1 (Component)p25, moderate constitutive <i>S. thermophilus</i> promoter
p_qrr4BBa_K131017 Version 1 (Component)p_qrr4 from <I>Vibrio harveyi</I>
BBa_K733018BBa_K733018 Version 1 (Component)<i>xylR</i>+<i>PxylA</i>+RBS+GFP+Double Terminator
BBa_K733002BBa_K733002 Version 1 (Component)<i>xylR</i>+<i>PxylA</i>: A xylose inducible promoter with its transcriptional regulator.
BBa_K1638003BBa_K1638003 Version 1 (Component)T25 domain of <i>cyaA</i> from <i>Bordetella pertussis</i> (IPTG inducible)
BBa_K733016BBa_K733016 Version 1 (Component)<i>Pveg</i>+RBS+<i>ydjM</i>+<i>Bmp2</i>+terminator
BBa_K733017BBa_K733017 Version 1 (Component)<i>Pveg</i>+RBS+<i>ybdN</i>+<i>Bmp2</i>+terminator
BBa_K602000BBa_K602000 Version 1 (Component)<i>Deinococcus radiodurans</i> PprI
PphoABBa_K1139200 Version 1 (Component)<i>phoA</i> promoter
BBa_K1315001BBa_K1315001 Version 1 (Component)The <i>pqsA</i> promoter from <i>Pseudomonas</i>
BBa_K602001BBa_K602001 Version 1 (Component)<i>Deinococcus radiodurans</i> PprA
BBa_K1315008BBa_K1315008 Version 1 (Component)The <i>cblD</i> promoter from <i>Burkholderia</i>
BBa_K325210BBa_K325210 Version 1 (Component)Red Firefly Luciferase and LRE<BR><i>L. Cruciata<BR>(E. coli optimised)</i>
BBa_K1315005BBa_K1315005 Version 1 (Component)The <i>clp</i> gene from <i>Xanthomonas campestris</i>
BBa_K1315003BBa_K1315003 Version 1 (Component)The <i>rpfG</i> gene from <i>Xanthomonas campestris</i>
BBa_K1315006BBa_K1315006 Version 1 (Component)The <i>manA</i> promoter from <i>Xanthomonas campestris</i>
BBa_K531001BBa_K531001 Version 1 (Component)<i>C. crescentus</i> S-layer RsaA C-term
BBa_K823001BBa_K823001 Version 1 (Component)P<sub><i>liaI</i></sub> promoter of <i>Bacillus subtilis</i>
BBa_K733009BBa_K733009 Version 1 (Component)<i>Ptms</i>+BBa_E0240: <i>Ptms</i>+RBS+GFP+Double
BBa_K1813015BBa_K1813015 Version 1 (Component)<i>nicD</i> Expression Casette
BBa_K1465301BBa_K1465301 Version 1 (Component)<i>adhA</i> gene from <i>Lactococcus lactis</i>
lytCFLAGBBa_K733008 Version 1 (Component)<i>lytC</i> + linker + FLAG???
BBa_K1813054BBa_K1813054 Version 1 (Component)pelB <i>AgCPR</i> Expression Cassette
BBa_K733011BBa_K733011 Version 1 (Component)<i>xylR</i>+<i>PxylA</i>+RBS+<i>ydcE</i>.
BBa_K1315011BBa_K1315011 Version 1 (Component)<i>Pseudomonas</i> AutoInducer-1 response unit (<i>lasB</i> promoter)
BBa_K1315012BBa_K1315012 Version 1 (Component)<i>Pseudomonas</i> AutoInducer-1 response unit (<i>luxR</i> promoter)
BBa_K531007BBa_K531007 Version 1 (Component)P<sub>rsaA</sub> constitutive promoter, <i>esp</i> optimized for <i>Caulobacter</i>, and <i>rsaA</i>
BBa_K602003BBa_K602003 Version 1 (Component)<i>Deinococcus radiodurans</i> RecA
BBa_K125100BBa_K125100 Version 1 (Component)nir promoter from <I>Synechocystis</I> sp. PCC6803
BBa_K325909BBa_K325909 Version 1 (Component)Lux Operon (under pBAD)<BR><i>Vibrio Fischeri</i>