SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I15008BBa_I15008 Version 1 (Component)heme oxygenase (ho1) from Synechocystis
BBa_I15009BBa_I15009 Version 1 (Component)phycocyanobilin:ferredoxin oxidoreductase (PcyA) from synechocystis
BBa_K2013012BBa_K2013012 Version 1 (Component)PCA 3.4-dioxygenase
BBa_K2013013BBa_K2013013 Version 1 (Component)PCA 3.4-dioxygenase
PcarBBa_K861171 Version 1 (Component)Pcar, synthetic promoter repressed by CRP
IFPBBa_K256008 Version 1 (Component)Infrared Protein (IFP 1.4)
BBa_K316003BBa_K316003 Version 1 (Component)XylE - catechol 2,3-dioxygenase from P.putida with terminator
BBa_K2091001BBa_K2091001 Version 1 (Component)Protocatechuate 3,4-dioxygenase Beta Subunit
BBa_K2091000BBa_K2091000 Version 1 (Component)Protocatechuate 3,4-dioxygenase Alpha Subunit
CDOBBa_K2004007 Version 1 (Component)Cysteine dioxygenase (CDO)
BBa_K081021BBa_K081021 Version 1 (Component)pcyA protein generator - PoPS->pcyA
BBa_K1604021BBa_K1604021 Version 1 (Component)J23100 + β-carotene 15,15’-dioxygenase (blh gene)
BBa_K1132011BBa_K1132011 Version 1 (Component)heme oxygenase (ho1) and ferredoxin oxidoreductase (PcyA)
BBa_K572009BBa_K572009 Version 1 (Component)Mouse Beta Carotene Dioxygenase
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K203110BBa_K203110 Version 1 (Component)Constitutive promoter; 0.4 REU
PTABBa_K901016 Version 1 (Component)Phosphotransacetylase (PTA) from <i>Escherichia coli</i>
BBa_K1507002BBa_K1507002 Version 1 (Component)Carotenoid Cleavage Dioxygenase 1 (CCD1)
EFEBBa_K1065000 Version 1 (Component)<html>2-oxoglutarate oxygenase/decarboxylase (EFE)</html>
BBa_K1092003BBa_K1092003 Version 1 (Component)T7-RBS-Dioxygenase
BBa_M11057BBa_M11057 Version 1 (Component)Toluene dioxygenase
BBa_K906000BBa_K906000 Version 1 (Component)Zeaxanthin 7,8-cleavage dioxygenase (ZCD)
BBa_K1132012BBa_K1132012 Version 1 (Component)heme oxygenase (ho1), ferredoxin oxidoreductase (PcyA) and tetracycline repressor (TetR)
BBa_K566023BBa_K566023 Version 1 (Component)pcyA gene (constitutive expression)
BBa_K808033BBa_K808033 Version 1 (Component)araC-Pbad regulated XylE - catechol 2,3-dioxygenase from P.putida with terminator
BBa_M1107BBa_M1107 Version 1 (Component)aromatic ring hydroxylating dioxygenase
BBa_K1604019BBa_K1604019 Version 1 (Component)RBS + β-carotene 15,15'-dioxygenase (blh gene)
BBa_K081017BBa_K081017 Version 1 (Component)pcyA protein generator (TERM-)
BBa_J331025BBa_J331025 Version 1 (Component)Anthranilate 1,2-dioxygenase - Small Subunit
BBa_J331024BBa_J331024 Version 1 (Component)anthranilate 1,2-dioxygenase - Large Subunit
BBa_K2013011BBa_K2013011 Version 1 (Component)TPA 1,2-dioxygenase
BBa_K2013009BBa_K2013009 Version 1 (Component)TPA 1,2-dioxygenase
BBa_K2013008BBa_K2013008 Version 1 (Component)TPA 1,2-dioxygenase
PctBBa_K2042000 Version 1 (Component)Propionate CoA transferase for P. putida
BBa_I723028BBa_I723028 Version 1 (Component)PCA biosynthesis operon
DioxyBBa_K1688022 Version 1 (Component)Catechol 1,2 Dioxygenase + HlyA export tag
BBa_K953000BBa_K953000 Version 1 (Component)Heme Oxygenase with T7 & RBS (E. coli Codon Optimised)
BBa_K2088000BBa_K2088000 Version 1 (Component)catechol 2,3-dioxygenase gene
PcrABO_9256 Version 1 (Component) BBa_K1132013BBa_K1132013 Version 1 (Component)heme oxygenase (ho1), ferredoxin oxidoreductase (PcyA) and tetracycline repressor (TetR) under const
BBa_M1106BBa_M1106 Version 1 (Component)aromatic ring hydroxylating dioxygenase
BBa_M1103BBa_M1103 Version 1 (Component)intradiol ring-cleavage dioxygenase
BBa_K572012BBa_K572012 Version 1 (Component)Constitutive Dioxygenase generator
BBa_K192099BBa_K192099 Version 1 (Component)catechol 1 2-dioxygenase