iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
PfadRBBa_K861060 Version 1 (Component)PfadR, synthetic promoter with tandem FadR binding site
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
FadRBO_11470 Version 1 (Component) BBa_K861062BBa_K861062 Version 1 (Component)PfadR with FadR overexpressed
BBa_K861047BBa_K861047 Version 1 (Component)PfadR regulated FadI and FadJ
BBa_K861046BBa_K861046 Version 1 (Component)PfadR regulated FadA and FadB
BBa_K817007BBa_K817007 Version 1 (Component)plac-RBS-FadR
BBa_K861028BBa_K861028 Version 1 (Component)PfadR regulated FadE
BBa_K861003BBa_K861003 Version 1 (Component)PfadR regulated FadL
BBa_K861016BBa_K861016 Version 1 (Component)PfadR regulated FadD
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K861048BBa_K861048 Version 1 (Component)PfadR regulated S-FadA and S-FadB
BBa_K861029BBa_K861029 Version 1 (Component)PfadR regulated S-FadE
BBa_K861349BBa_K861349 Version 1 (Component)PfadR with FadA, intermediate part for BBa_K861046
BBa_K861350BBa_K861350 Version 1 (Component)PfadR with FadI, intermediate part for BBa_K861047
fadRBO_30753 Version 1 (Component) BBa_K861351BBa_K861351 Version 1 (Component)PfadR with S-FadA, intermediate part for BBa_K861048
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
PadRBO_10873 Version 1 (Component) padRBO_31090 Version 1 (Component) BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_K861052BBa_K861052 Version 1 (Component)Constitutive expressed FadR
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K641014BBa_K641014 Version 1 (Component)P(fadR) - Stress Promoter
BBa_K861051BBa_K861051 Version 1 (Component)FadR with a RBS and a terminator
BBa_K1076001BBa_K1076001 Version 1 (Component)Flanking genes for FadR deletion
BBa_K861022BBa_K861022 Version 1 (Component)FadE with RBS and terminator
BBa_K1507013BBa_K1507013 Version 1 (Component)Fatty acid induced expression auto regulator (J23119-B0034-FadR-B0015- J23119-B0034-FadL-B0015)
BBa_K861061BBa_K861061 Version 1 (Component)Efficacy testing RFP generator of BBa_K861060 (PfadR)
fapRBO_31001 Version 1 (Component) BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K1076000BBa_K1076000 Version 1 (Component)fatty acid metabolism regulator protein FadR
FadABBa_K861400 Version 1 (Component)FadA protein coding sequence for fatty acid degradation
BBa_K1507000BBa_K1507000 Version 1 (Component)PfadBA Repressor (J23119- B0034-FadR-B0015)
BBa_K861011BBa_K861011 Version 1 (Component)FadD with RBS and terminator.
BBa_K1747003BBa_K1747003 Version 1 (Component)GFP generator regulated by FadR repressor
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)