iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_K175047BBa_K175047 Version 1 (Component)Plasmid 2 for Transcriptional Cascade subproject TU Delft iGEM 09
BBa_M36010BBa_M36010 Version 1 (Component)Transcription Terminator (Strong)
BBa_K175046BBa_K175046 Version 1 (Component)Plasmid 1 for Transcriptional Cascade subproject TU Delft iGEM 09
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
BBa_K165010BBa_K165010 Version 1 (Component)ADH1 yeast transcription terminator
BBa_I741005BBa_I741005 Version 1 (Component)XylR Transcriptional Regulator Right Facing
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K510000BBa_K510000 Version 1 (Component)pUC18Sfi-miniTn7BB-Gm
BBa_K1824889BBa_K1824889 Version 1 (Component)A Transcriptional Spacer Sequence
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_B0054BBa_B0054 Version 1 (Component)Transcriptional terminator
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K1906004BBa_K1906004 Version 1 (Component)Elongation Factor Tu
fhlABBa_K778001 Version 1 (Component)fhlA: a transcriptional activator for enhanced hydrogen production
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_J16002BBa_J16002 Version 1 (Component)iGEM tutorial part (2)
BBa_K1779213BBa_K1779213 Version 1 (Component)mamAB Operon 09
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria