SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K929301BBa_K929301 Version 1 (Component)Potsdam Standard Backbone
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
BBa_K929302BBa_K929302 Version 1 (Component)AID in Potsdam Standard
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_K648013BBa_K648013 Version 1 (Component)GFP with Standard 25 Prefix/Suffix
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K929300BBa_K929300 Version 1 (Component)Potsdam Standard Backbone
BBa_K911006BBa_K911006 Version 1 (Component)Non-standard backbone for luciferase construct
BBa_K1051002BBa_K1051002 Version 1 (Component)Stop codon free EYFP in RFC[23] standard
BBa_K883600BBa_K883600 Version 1 (Component)Berkeley KILR coil in Standard 10 backbone
BBa_I745000BBa_I745000 Version 1 (Component)Backbone TRE plasmid
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K1051001BBa_K1051001 Version 1 (Component)Stop codon free ECFP in RFC[23] standard
BBa_K1500001BBa_K1500001 Version 1 (Component)ParoF-mCherry backbone
BBa_K1500002BBa_K1500002 Version 1 (Component)IPTG promoter-GFP (IG) backbone
linkerBBa_K157009 Version 1 (Component)Split fluorophore linker; Freiburg standard
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
RFC105 CCBBa_K1362419 Version 1 (Component)C-terminal splicing overhang CAAC=1/3?+Asn RFC[105] standard overhang CC
cI 434BBa_R1052 Version 1 (Component)Promoter, Standard (434 cI regulated)<br>
cI HK022BBa_R1050 Version 1 (Component)Promoter, Standard (HK022 cI regulated) <br>
BBa_K648011BBa_K648011 Version 1 (Component)Standard 25-Ready Xyle Reporter
BBa_K392008BBa_K392008 Version 1 (Component)C. firmi beta-glucosidase (Silver standard compatible)
BBa_K1971011BBa_K1971011 Version 1 (Component)psb1c3 backbone with BsaI site
BBa_K1223009BBa_K1223009 Version 1 (Component)pUC57 backbone (REVERSED)
BBa_J42040BBa_J42040 Version 1 (Component)recomb. backbone
BBa_K2100081BBa_K2100081 Version 1 (Component)pEXPR Backbone
BBa_K1971005BBa_K1971005 Version 1 (Component)pet28a backbone with BsaI site
BBa_K300005BBa_K300005 Version 1 (Component)GFP (Silver Standard Prefix) with terminator
BBa_K404319BBa_K404319 Version 1 (Component)Cyan fluorescent protein (CFP) in RFC25 standard
BBa_K392006BBa_K392006 Version 1 (Component)C. firmi CenA (Silver standard compatible)
BBa_K121016BBa_K121016 Version 1 (Component)Tokyo Standard prefix suffix RBS
BBa_K1824890BBa_K1824890 Version 1 (Component)The Sequence of the SpeI/XbaI scar in BioBricks standard assembly.
BBa_K283034BBa_K283034 Version 1 (Component)motB (Backbone: pSB1AK3)
BBa_K1351012BBa_K1351012 Version 1 (Component)spaS Subtilin (antimicrobial peptide, Freiburg standard)
BBa_K1925006BBa_K1925006 Version 1 (Component)mitronic GFP backbone
BBa_K283046BBa_K283046 Version 1 (Component)LacY (Backbone: pSB1AK3)
BBa_K2100082BBa_K2100082 Version 1 (Component)miRNA Sensor Backbone
BBa_K648012BBa_K648012 Version 1 (Component)LacZa wtih Standard 25 Prefix/Suffix
BBa_K1199009BBa_K1199009 Version 1 (Component)Modified pBAD backbone
BBa_K392007BBa_K392007 Version 1 (Component)C. firmi Cex (Silver standard compatible)
BBa_K174018BBa_K174018 Version 1 (Component)GENEART PMQ Plasmid Backbone
BBa_K112000BBa_K112000 Version 1 (Component)T4 holin, complete CDS, berkeley standard