Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J70016BBa_J70016 Version 1 (Component)PpiI Right Testing Part
BBa_J70015BBa_J70015 Version 1 (Component)PpiI and PsrI LASR Left Testing Part
BBa_J70019BBa_J70019 Version 1 (Component)PsrI Right Testing Part for LASR parts
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_J70010BBa_J70010 Version 1 (Component)A BioScaffold Part (Uses PpiI), for offset see Part Design page
BBa_I741005BBa_I741005 Version 1 (Component)XylR Transcriptional Regulator Right Facing
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_J70030BBa_J70030 Version 1 (Component)A BioScaffold Part (Uses PpiI), Protein Tail Remover see Part Design Page
BBa_K576004BBa_K576004 Version 1 (Component)Right Part of Self-Excising Ribozyme
BBa_K075000BBa_K075000 Version 1 (Component)Testing part
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K1568005BBa_K1568005 Version 1 (Component)testing the part stuff
BBa_J37002BBa_J37002 Version 1 (Component)Testing parts
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
BBa_J70017BBa_J70017 Version 1 (Component)PpiI (1) LASR Part Test Construct
BBa_J70018BBa_J70018 Version 1 (Component)PpiI (2) LASR Part Test Construct
BBa_J70080BBa_J70080 Version 1 (Component)BBa_J70030 (PpiI) protein fusion test part
BBa_J70060BBa_J70060 Version 1 (Component)BBa_J70010 (PpiI) protein fusion test part
BBa_J70061BBa_J70061 Version 1 (Component)BBa_J70009 (PpiI) protein fusion test part
BBa_K602000BBa_K602000 Version 1 (Component)<i>Deinococcus radiodurans</i> PprI
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_T1002BBa_T1002 Version 1 (Component)Testing the categories
BBa_K415506BBa_K415506 Version 1 (Component)pTRE-Tight L4R1 MammoBlock
BBa_T1021BBa_T1021 Version 1 (Component)Testing new parts
BBa_J70090BBa_J70090 Version 1 (Component)BBa_J70032 (PpiI/PsrI) protein fusion test part
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_J70210BBa_J70210 Version 1 (Component)A BioScaffold Part (Uses PpiI), similar to J70010 see Part Design Page
BBa_S00002BBa_S00002 Version 1 (Component)testing composite part creation
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
C2HP/RGEBBa_K1442107 Version 1 (Component)C2HP Testing Module (reverse GFP)
BBa_J70065BBa_J70065 Version 1 (Component)Adds 6 his suffix, using BioScaffold part J70009 (PpiI)
BBa_J70064BBa_J70064 Version 1 (Component)Adds 6 his suffix, using BioScaffold part J70010 (PpiI)
BBa_J70082BBa_J70082 Version 1 (Component)Adds 6 his prefix, using BioScaffold part J70030 (PpiI)
BBa_K801039BBa_K801039 Version 1 (Component)SV40NLS-GAL4AD-linker-PIF3 (part for GAL4/LexA based light-switchable promoter system)
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
PpiBBO_9556 Version 1 (Component) BBa_J70021BBa_J70021 Version 1 (Component)PsrI (2) LASR Part Testing Construct
BBa_J70020BBa_J70020 Version 1 (Component)PsrI (1) LASR Part Testing Construct
BBa_J70052BBa_J70052 Version 1 (Component)Right Library Insert Preparation Part (To use with J70050, and J70040)