SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_I4004BBa_I4004 Version 1 (Component)Prakash: Design 4
BBa_I4200BBa_I4200 Version 1 (Component)Prakash *: Synchronator Design 4
BBa_K264003BBa_K264003 Version 1 (Component)Modular UP-element Design 4
BBa_I4001BBa_I4001 Version 1 (Component)Prakash: Design 1
BBa_I4003BBa_I4003 Version 1 (Component)Prakash: Design 3
BBa_I4002BBa_I4002 Version 1 (Component)Prakash: Design 2
BBa_I4201BBa_I4201 Version 1 (Component)Prakash *: Synchronator Design 1
BBa_I4202BBa_I4202 Version 1 (Component)Prakash *: Synchronator Design 2
BBa_I4203BBa_I4203 Version 1 (Component)Prakash *: Synchronator Design 3
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
Kozak & stBBa_J63003 Version 1 (Component)designed yeast Kozak sequence
BBa_I4204BBa_I4204 Version 1 (Component)Prakash *: Syncronator Cell-Signalling Module
BBa_K1497010BBa_K1497010 Version 1 (Component)Dihydroflavonol 4-reductase (DFR)
BBa_K264045BBa_K264045 Version 1 (Component)UP Element Design 4 with BBa_J23101
BBa_I4214BBa_I4214 Version 1 (Component)Synchronator design 4, Output-
BBa_J202003BBa_J202003 Version 1 (Component)PBAD Mutant#4
BBa_I4102BBa_I4102 Version 1 (Component)Prakash: Segment 2
LacBBa_K500003 Version 1 (Component)lignin degradation 4
BBa_I4103BBa_I4103 Version 1 (Component)Prakash: Segment 3
BBa_I4101BBa_I4101 Version 1 (Component)Prakash: Segment 1
BBa_K801093BBa_K801093 Version 1 (Component)4-coumarate--coenzyme A ligase (4CL) coding region
BBa_I13515BBa_I13515 Version 1 (Component)Screening Plasmid 4
ssrA(DAS+4BBa_K1075020 Version 1 (Component)E. coli ssrA(DAS+4)
BBa_K1150042BBa_K1150042 Version 1 (Component)uniCAS RNaimer to Bla Target 4
BBa_J07012BBa_J07012 Version 1 (Component)scFv anti-fluorescein [4-4-20]
BBa_K264013BBa_K264013 Version 1 (Component)Up Element design 4 with constitutive promoter BBa_J23101
BBa_K2066020BBa_K2066020 Version 1 (Component)UNS 4 Sequence, from Torella et al., 2013
BBa_K1351031BBa_K1351031 Version 1 (Component)LMU Bacillus RBS collection 4
BBa_K1150067BBa_K1150067 Version 1 (Component)Cas9 trunc. #4
BBa_J24683BBa_J24683 Version 1 (Component)4. W RBS - LacI
P11-4BBa_K2015001 Version 1 (Component)P11-4
BBa_K264001BBa_K264001 Version 1 (Component)Modular UP-element Design 2
BBa_K416004BBa_K416004 Version 1 (Component)Aga2:(Gly3Ser)4 Linker Composite Part
BBa_J70010BBa_J70010 Version 1 (Component)A BioScaffold Part (Uses PpiI), for offset see Part Design page
BBa_K801092BBa_K801092 Version 1 (Component)4-coumarate - coenzym A ligase (4CL) + yeast consensus sequence
scFvBBa_K1933002 Version 1 (Component)anti-Norovirus GII.4 scFv
BBa_M36034BBa_M36034 Version 1 (Component)BCD02 - Bicistronic Design 02
BBa_K1470002BBa_K1470002 Version 1 (Component)Galactose-induced gene 4 DNA binding domain (Gal4DBD)
4-SDBBa_J05040 Version 1 (Component)4-State Device
BBa_J70012BBa_J70012 Version 1 (Component)A BioScaffold Part (Uses PsrI), Protein Head Remover see Part Design page