SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K2066019
BBa_K2066019 Version 1 (Component)
UNS 3 Sequence, from Torella et al., 2013

BBa_I4203
BBa_I4203 Version 1 (Component)
Prakash *: Synchronator Design 3

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

BBa_I4200
BBa_I4200 Version 1 (Component)
Prakash *: Synchronator Design 4

BBa_I4201
BBa_I4201 Version 1 (Component)
Prakash *: Synchronator Design 1

BBa_I4202
BBa_I4202 Version 1 (Component)
Prakash *: Synchronator Design 2

BBa_I4204
BBa_I4204 Version 1 (Component)
Prakash *: Syncronator Cell-Signalling Module

BBa_I4003
BBa_I4003 Version 1 (Component)
Prakash: Design 3

BBa_I4213
BBa_I4213 Version 1 (Component)
Synchronator design 3, Output-

BBa_I4004
BBa_I4004 Version 1 (Component)
Prakash: Design 4

BBa_I4001
BBa_I4001 Version 1 (Component)
Prakash: Design 1

BBa_I4002
BBa_I4002 Version 1 (Component)
Prakash: Design 2

BBa_I4103
BBa_I4103 Version 1 (Component)
Prakash: Segment 3

BBa_I4212
BBa_I4212 Version 1 (Component)
Synchronator design 2, Output-

BBa_I4211
BBa_I4211 Version 1 (Component)
Synchronator design 1, Output-

BBa_I4214
BBa_I4214 Version 1 (Component)
Synchronator design 4, Output-

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

Kozak & st
BBa_J63003 Version 1 (Component)
designed yeast Kozak sequence

HP3 3
BBa_B0101 Version 1 (Component)
HP3 3

BBa_K264002
BBa_K264002 Version 1 (Component)
Modular UP-element Design 3

BBa_K309012
BBa_K309012 Version 1 (Component)
Unc-54 3' UTR (for use in C. elegans chassis)

BBa_K165011
BBa_K165011 Version 1 (Component)
Zif268-HIV binding sites (3)

BBa_I4102
BBa_I4102 Version 1 (Component)
Prakash: Segment 2

RFC105 NN
BBa_K1362415 Version 1 (Component)
N-terminal splicing overhang TGCT=Cys+1/3 Leu|Ile RFC[105] overhang NN

BBa_I4101
BBa_I4101 Version 1 (Component)
Prakash: Segment 1

BBa_K1763424
BBa_K1763424 Version 1 (Component)
MaSp2-3(1C3)

BBa_K1061003
BBa_K1061003 Version 1 (Component)
RIP 3

BBa_M300052
BBa_M300052 Version 1 (Component)
m13k07 - Gene 3

BBa_K1351030
BBa_K1351030 Version 1 (Component)
LMU Bacillus RBS collection 3

BBa_J202002
BBa_J202002 Version 1 (Component)
PBAD Mutant#3

HMG-CoA-R
BBa_K849000 Version 1 (Component)
3-Hydroxy-3-Methyl-Glutaryl-CoA-Reductase from Yeast

Mcfp3
BBa_K1592001 Version 1 (Component)
Mytilus californianus foot protein 3(Mcfp3) variant 3　

BBa_K500002
BBa_K500002 Version 1 (Component)
lignin degradation 3

BBa_I13514
BBa_I13514 Version 1 (Component)
Screening Plasmid 3

RFC105 CC
BBa_K1362419 Version 1 (Component)
C-terminal splicing overhang CAAC=1/3?+Asn RFC[105] standard overhang CC

BBa_K264012
BBa_K264012 Version 1 (Component)
Up Element design 3 with constitutive promoter BBa_J23101

BBa_K1763425
BBa_K1763425 Version 1 (Component)
MaSp2-3(T7)

BBa_K1763000
BBa_K1763000 Version 1 (Component)
Apis mellifera (honeybee) silk fibroin 3

Gata3-3
BBa_I745009 Version 1 (Component)
siGata3-3'

KP3
BBa_J01006 Version 1 (Component)
Key Promoter absorbs 3

Bioplastic
BBa_K156014 Version 1 (Component)
phaC1 (Poly(3-hydroxybutyrate) polymerase)

BBa_K1150041
BBa_K1150041 Version 1 (Component)
uniCAS RNaimer to Bla Target 3

BBa_K2095002
BBa_K2095002 Version 1 (Component)
RBCS2 3

BBa_K264001
BBa_K264001 Version 1 (Component)
Modular UP-element Design 2

BBa_K264003
BBa_K264003 Version 1 (Component)
Modular UP-element Design 4